RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 EDDM13A0A1B0GTR0 161 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 CLDN5O00501 218 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 E2F3O00716 465 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 OGTO15294 1046 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 CPNE6O95741 557 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 KRT19P08727 400 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 CD70P32970 193 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 CSNK1G2P78368 415 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 CNTN1Q12860 1018 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 SOWAHAQ2M3V2 549 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 KYAT3Q6YP21 454 aaKnown RBP6.79□□□□□ -1.32
HDAC3-206ENST00000471968 KIAA0907Q7Z7F0 614 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-206ENST00000471968 KCNMB4Q86W47 210 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 HORMAD1Q86X24 394 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 HPS6Q86YV9 775 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 DENND1CQ8IV53 801 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 ESX1Q8N693 406 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 TOP6BLQ8N6T0 577 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.79□□□□□ -1.32
HDAC3-206ENST00000471968 SCG3Q8WXD2 468 aaKnown RBP6.79□□□□□ -1.32
HDAC3-206ENST00000471968 RELTQ969Z4 430 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 RNF31Q96EP0 1072 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 TEFMQ96QE5 360 aaKnown RBP6.79□□□□□ -1.32
HDAC3-206ENST00000471968 CGRRF1Q99675 332 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 NUDT22Q9BRQ3 303 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 NUDT9Q9BW91 350 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 SLC13A1Q9BZW2 595 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 ELOVL4Q9GZR5 314 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 ING2Q9H160 280 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 TLR8Q9NR97 1041 aaKnown RBP6.79□□□□□ -1.32
HDAC3-206ENST00000471968 OSER1Q9NX31 292 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 CPSF3Q9UKF6 684 aaKnown RBP6.79□□□□□ -1.32
HDAC3-206ENST00000471968 GPR34Q9UPC5 381 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 AGAP1Q9UPQ3 857 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 B3GNT3Q9Y2A9 372 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 B4E171 279 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 MSI1O43347 362 aaKnown RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 CREG1O75629 220 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 EDN3P14138 238 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 GLB1P16278 677 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 TSPAN7P41732 249 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 TXKP42681 527 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 VAMP7P51809 220 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 THOP1P52888 689 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 TAS2R38P59533 333 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 DSG2Q14126 1118 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 ARHGEF7Q14155 803 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 KMT5BQ4FZB7 885 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 MPPE1Q53F39 396 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 C10orf120Q5SQS8 335 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 FAXCQ5TGI0 409 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 SCARA3Q6AZY7 606 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 RPTNQ6XPR3 784 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 MEX3BQ6ZN04 569 aaKnown RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 ZNF765Q7L2R6 523 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 ULK2Q8IYT8 1036 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 DAW1Q8N136 415 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 SYT2Q8N9I0 419 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 FDCSPQ8NFU4 85 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 KBTBD7Q8WVZ9 684 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 MTFMTQ96DP5 389 aaKnown RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 MRGPRX3Q96LB0 322 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 TCEANC2Q96MN5 208 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 LARP6Q9BRS8 491 aaKnown RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 TMEM121Q9BTD3 319 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 SLC26A6Q9BXS9 759 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 ASB7Q9H672 318 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 TUFT1Q9NNX1 390 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 TNFRSF10DQ9UBN6 386 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 USP25Q9UHP3 1055 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 SARDHQ9UL12 918 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 G3BP2Q9UN86 482 aaKnown RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 TMEM184BQ9Y519 407 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 HS3ST3A1Q9Y663 406 aa6.78□□□□□ -1.32
HDAC3-206ENST00000471968 SONP18583 2426 aaKnown RBP6.78□□□□□ -1.32
HDAC3-206ENST00000471968 ZGRF1Q86YA3 2104 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 CCDC196A0A1B0GTZ2 297 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 FAM92AA1XBS5 289 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 A6NL46 340 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 SFI1A8K8P3 1242 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 RAD51BO15315 384 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 HIP1RO75146 1068 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 DLGAP3O95886 979 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 MAPTP10636 758 aaKnown RBP6.77□□□□□ -1.33
HDAC3-206ENST00000471968 MPSTP25325 297 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 CASP14P31944 242 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 ACOT2P49753 483 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 LIG4P49917 911 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 ELAVL3Q14576 367 aaKnown RBP6.77□□□□□ -1.33
HDAC3-206ENST00000471968 ZNF235Q14590 738 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 CERCAMQ5T4B2 595 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 SEL1L3Q68CR1 1132 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 HMBOX1Q6NT76 420 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 SLC47A2Q86VL8 602 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 CPXM2Q8N436 756 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 TMEM161BQ8NDZ6 487 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 WFDC5Q8TCV5 224 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 TMC2Q8TDI7 906 aa6.77□□□□□ -1.33
HDAC3-206ENST00000471968 INPP5DQ92835 1189 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms