RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 ETFBP38117 255 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 RECQLP46063 649 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 DNA2P51530 1060 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 CLCN6P51797 869 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 METAP1P53582 386 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 ATXN3P54252 364 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 TPI1P60174 286 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 ZNF252P-AS1Q0IIN9 211 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 TRIM14Q14142 442 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 POLD3Q15054 466 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 UAP1L1Q3KQV9 507 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 CCDC122Q5T0U0 273 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 FAM46CQ5VWP2 391 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 RETSATQ6NUM9 610 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 C22orf39Q6P5X5 142 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 SLC23A3Q6PIS1 610 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 LEKR1Q6ZMV7 388 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 AADATQ8N5Z0 425 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 OR14C36Q8NHC7 312 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 DEF6Q9H4E7 631 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 DHX35Q9H5Z1 703 aaKnown RBP12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 RETREG1Q9H6L5 497 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 TMEM248Q9NWD8 314 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 ZNHIT6Q9NWK9 470 aaKnown RBP12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 ARHGAP20Q9P2F6 1191 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 SLC6A14Q9UN76 642 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 AP4E1Q9UPM8 1137 aa12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3F-204ENST00000471261 LRRC72A6NJI9 287 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 C1QTNF3-AMACRE9PGA6 284 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 PLK4O00444 970 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 MCF2LO15068 1137 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 C7P10643 843 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 GOT1P17174 413 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 MIPP30301 263 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 EIF4A3P38919 411 aaKnown RBP12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 SERPINH1P50454 418 aaKnown RBP12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 LIMK1P53667 647 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 ERMARDQ5T6L9 678 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 ALKBH5Q6P6C2 394 aaKnown RBP12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 NCEH1Q6PIU2 408 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 ARFGAP1Q8N6T3 406 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 OR8K1Q8NGG5 319 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 PIP4K2CQ8TBX8 421 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 GRIN3AQ8TCU5 1115 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 FNIP1Q8TF40 1166 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 DNASE2BQ8WZ79 361 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 ARHGEF2Q92974 986 aaKnown RBP12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 NUP85Q9BW27 656 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 PCED1AQ9H1Q7 454 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 MAGEH1Q9H213 219 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 CATSPERBQ9H7T0 1116 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 CAPN10Q9HC96 672 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 SARDHQ9UL12 918 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 FZD4Q9ULV1 537 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 FCF1Q9Y324 198 aaKnown RBP12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 ACTL7AQ9Y615 435 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 NUP205Q92621 2012 aa12.89□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3DA0A087WVF3 549 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3IA0A087WXS9 549 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3EA0A087X179 549 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3KA0A087X1G2 549 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 A0A1B0GTW7 788 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3FA6NER0 549 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3LB9A6J9 549 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 EEF2KO00418 725 aaKnown RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 KPNA3O00505 521 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 ARHGAP33O14559 1287 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 CDX4O14627 284 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 ALOX15BO15296 676 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 BCAT2O15382 392 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 FGF10O15520 208 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 DAPK3O43293 454 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 ZMPSTE24O75844 475 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3HP0C7X1 549 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 CHRNA3P32297 505 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 GALCP54803 685 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 ADPRHP54922 357 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 ADKP55263 362 aaKnown RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 ARF5P84085 180 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 SLC20A2Q08357 652 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 CA9Q16790 459 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 PPP6R3Q5H9R7 873 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 KIAA0895LQ68EN5 471 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3GQ6DHY5 549 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3CQ6IPX1 549 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 ERMP1Q7Z2K6 904 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 TBC1D3Q8IZP1 549 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 RTL3Q8N8U3 475 aaKnown RBP12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 CHST14Q8NCH0 376 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 OR2A12Q8NGT7 310 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 OR2I1PQ8NGU4 316 aa12.88□□□□□ -0.35
PPP1R3F-204ENST00000471261 BTBD6Q96KE9 485 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms