RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PHTF1Q9UMS5 762 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 TRDMT1O14717 391 aaKnown RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 FOXD2O60548 495 aaPredicted RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 CCDC22O60826 627 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 TMCC2O75069 709 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 CHEK2O96017 543 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 PABPC1P11940 636 aaKnown RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 ANPEPP15144 967 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 ZNF132P52740 706 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 ASPHQ12797 758 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 SV2CQ496J9 727 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 FYB2Q5VWT5 728 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 LCLAT1Q6UWP7 414 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 VSTM1Q6UX27 236 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 BBS12Q6ZW61 710 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 METTL23Q86XA0 190 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 MCUQ8NE86 351 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 ZNF669Q96BR6 464 aaPredicted RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 TRPV6Q9H1D0 765 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 RRN3Q9NYV6 651 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 PADI3Q9ULW8 664 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 PCDHGA3Q9Y5H0 932 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 CXorf49A8MYA2 514 aaPredicted RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 CD4P01730 458 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 NUDT17P0C025 328 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 FOXN2P32314 431 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 DRG2P55039 364 aaKnown RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 SNX16P57768 344 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 CAV1Q03135 178 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 PDK3Q15120 406 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 KCNA10Q16322 511 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 MTDHQ86UE4 582 aaKnown RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 GABPB2Q8TAK5 448 aaPredicted RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 EMID1Q96A84 441 aaPredicted RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 C2orf49Q9BVC5 232 aaPredicted RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 WDCPQ9H6R7 721 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 SIAEQ9HAT2 523 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 MPP6Q9NZW5 540 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 NME7Q9Y5B8 376 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 CCL22O00626 93 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 PMM2O15305 246 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 CCND3P30281 292 aaPredicted RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 ATICP31939 592 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 PGM1P36871 562 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 CLDN10P78369 228 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 KDSRQ06136 332 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 MORF4L2Q15014 288 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 CYP1B1Q16678 543 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 RGMBQ6NW40 437 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 IYDQ6PHW0 289 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 RFPL4BQ6ZWI9 263 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 POLNQ7Z5Q5 900 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 EIF1ADQ8N9N8 165 aaKnown RBP12.56□□□□□ -0.4
USP11-206ENST00000469080 ZBED2Q9BTP6 218 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 STAP1Q9ULZ2 295 aa12.56□□□□□ -0.4
USP11-206ENST00000469080 TCRBV9S1A1TA0A576 114 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 AP3B1O00203 1094 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 MFSD11O43934 449 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 ITGB1P05556 798 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 AKR1A1P14550 325 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 GRB14Q14449 540 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 RNASEH2BQ5TBB1 312 aaKnown RBP12.55□□□□□ -0.4
USP11-206ENST00000469080 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 GPRIN1Q7Z2K8 1008 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 OR52K1Q8NGK4 314 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 PCED1BQ96HM7 432 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 KCTD15Q96SI1 283 aaPredicted RBP12.55□□□□□ -0.4
USP11-206ENST00000469080 HGH1Q9BTY7 390 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 SPON2Q9BUD6 331 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 DNAI2Q9GZS0 605 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 KLHL25Q9H0H3 589 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 TKTL2Q9H0I9 626 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 PPARGC1AQ9UBK2 798 aaKnown RBP12.55□□□□□ -0.4
USP11-206ENST00000469080 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 C5orf42Q9H799 3197 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 TTC34A8MYJ7 566 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 FAM72CH0Y354 149 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 H3BSA7 217 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 RNF103O00237 685 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 CIB2O75838 187 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 SLC5A2P31639 672 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 ACADVLP49748 655 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 CHN2P52757 468 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 CCL23P55773 120 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 GPX6P59796 221 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 MAXP61244 160 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 MGAT5BQ3V5L5 792 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 FAM72AQ5TYM5 149 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 BTBD8Q5XKL5 378 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 FAM72DQ6L9T8 149 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 FAM72BQ86X60 149 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 GRAMD1AQ96CP6 724 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 XAB2Q9HCS7 855 aaKnown RBP12.55□□□□□ -0.4
USP11-206ENST00000469080 C6orf203Q9P0P8 240 aaPredicted RBP12.55□□□□□ -0.4
USP11-206ENST00000469080 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
USP11-206ENST00000469080 A8MU76 341 aa12.54□□□□□ -0.4
USP11-206ENST00000469080 GSC2O15499 205 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms