RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 LRRC40Q9H9A6 602 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 PRDM16Q9HAZ2 1276 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 C20orf96Q9NUD7 363 aaPredicted RBP11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 DMTF1Q9Y222 760 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 FIS1Q9Y3D6 152 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 ACOT8O14734 319 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 HDCP19113 662 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 ME2P23368 584 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 PTPN3P26045 913 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 NME3Q13232 169 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 MPP3Q13368 585 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 KIZQ2M2Z5 673 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 DCAF6Q58WW2 860 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 RIOX2Q8IUF8 465 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 ADCY4Q8NFM4 1077 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 PDCD6IPQ8WUM4 868 aaKnown RBP11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 ZFRQ96KR1 1074 aaKnown RBP11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 C1QTNF1Q9BXJ1 281 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 DRC3Q9H069 523 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 SPATC1LQ9H0A9 340 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 ADAM28Q9UKQ2 775 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 RNF11Q9Y3C5 154 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 COPG1Q9Y678 874 aaKnown RBP11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 A0A0J9YVX5 310 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 HBP1O60381 514 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 TSPAN1O60635 241 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 TOMM70O94826 608 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 MPOP05164 745 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SETSIPP0DME0 302 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 RPL10P27635 214 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 NMBRP28336 390 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 TKTP29401 623 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ART3Q13508 389 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 TMEM135Q86UB9 458 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ZNF410Q86VK4 478 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 RNF169Q8NCN4 708 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 CEP70Q8NHQ1 597 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SCYL1Q96KG9 808 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 OMDQ99983 421 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 MLPHQ9BV36 600 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC2A11Q9BYW1 496 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ZBTB26Q9HCK0 441 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ANLNQ9NQW6 1124 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SNTG2Q9NY99 539 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 CEPT1Q9Y6K0 416 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 TCAF2A6NFQ2 919 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 KCNU1A8MYU2 1149 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 MAGEB3O15480 346 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ZBTB24O43167 697 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 BCAS2O75934 225 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ZNF26P17031 533 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 CD68P34810 354 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 GALK1P51570 392 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 BST2Q10589 180 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM187BQ17R55 369 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 TMEM259Q4ZIN3 620 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 LIPMQ5VYY2 423 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ZFP1Q6P2D0 407 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ZDHHC17Q8IUH5 632 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC7A14Q8TBB6 771 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM110BQ8TC76 370 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC2A14Q8TDB8 520 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 NLRP7Q8WX94 980 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 DNAAF2Q9NVR5 837 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 IGSF9Q9P2J2 1179 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 CDYLQ9Y232 598 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 TSC2P49815 1807 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 NDUFV1P49821 464 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ADIGQ0VDE8 80 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 RALGDSQ12967 914 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 MGAT5BQ3V5L5 792 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SYPL2Q5VXT5 272 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ZYG11AQ6WRX3 759 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 RPS27LQ71UM5 84 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 PSTKQ8IV42 348 aaKnown RBP11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC41A1Q8IVJ1 513 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 LRTOMTQ8WZ04 291 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 APBA2Q99767 749 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 SMARCAD1Q9H4L7 1026 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 COQ10BQ9H8M1 238 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 ADA2Q9NZK5 511 aa11.93□□□□□ -0.5
PDZRN3-203ENST00000462146 I6L893 689 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 PLOD2O00469 737 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 XPO1O14980 1071 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 AP2A1O95782 977 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 STAU1O95793 577 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 CDH2P19022 906 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 MATKP42679 507 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 EMP3P54852 163 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 ZBTB17Q13105 803 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 USP41Q3LFD5 358 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 HFE2Q6ZVN8 426 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 STRADAQ7RTN6 431 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 CHERPQ8IWX8 916 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 EXOC8Q8IYI6 725 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 NUP93Q8N1F7 819 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 FSTL5Q8N475 847 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 CPSF7Q8N684 471 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms