RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SQORQ9Y6N5 450 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 FSCN2O14926 492 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 CHRM1P11229 460 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 MAGEA8P43361 318 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 ALDH7A1P49419 539 aaKnown RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SLC15A2Q16348 729 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 VN1R5Q7Z5H4 357 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 TRABD2AQ86V40 505 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 POC5Q8NA72 575 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 ZBTB8BQ8NAP8 495 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SUN5Q8TC36 379 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 GTF3C2Q8WUA4 911 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 TUBGCP5Q96RT8 1024 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 ACSS3Q9H6R3 686 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 ARL8BQ9NVJ2 186 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 ASTN2O75129 1339 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 AREL1O15033 823 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 CYP1A1P04798 512 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 CETPP11597 493 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 OR1E1P30953 314 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 PDZK1Q5T2W1 519 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SAPCD2Q86UD0 394 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 OMDQ99983 421 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 OSBPL6Q9BZF3 934 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 HDHD2Q9H0R4 259 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 MIEF1Q9NQG6 463 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 FAM50BQ9Y247 325 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 A0A0A0MRY4 1105 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 AVILO75366 819 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SH3BGRLO75368 114 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 TAS2R40P59535 323 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 PSME3P61289 254 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 MSLNQ13421 630 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 KHDC1Q4VXA5 237 aaKnown RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 TNS4Q8IZW8 715 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SPATA13Q96N96 652 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 HGH1Q9BTY7 390 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 PHACTR1Q9C0D0 580 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 LYPLA1O75608 230 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 FMO4P31512 558 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 CCT3P49368 545 aaKnown RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF157P51786 506 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 STARD3Q14849 445 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 PFKFB4Q16877 469 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 LRRC38Q5VT99 294 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SLC41A1Q8IVJ1 513 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 PQLC1Q8N2U9 271 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SFRP1Q8N474 314 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SPATA20Q8TB22 786 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SKA1Q96BD8 255 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 TLCD1Q96CP7 247 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 CERS2Q96G23 380 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 COLEC11Q9BWP8 271 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 WDR12Q9GZL7 423 aaKnown RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 S100A14Q9HCY8 104 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SLC17A7Q9P2U7 560 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 RWDD3Q9Y3V2 267 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 DYRK1BQ9Y463 629 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 NWD1Q149M9 1564 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ZMYM2Q9UBW7 1377 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 DCDC2CA8MYV0 355 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 TECPR2O15040 1411 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 MSH3P20585 1137 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 IL27RAQ6UWB1 636 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 AKAP14Q86UN6 197 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF276Q8N554 614 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 UBASH3BQ8TF42 649 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 SENP6Q9GZR1 1112 aaPredicted RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 TKTL2Q9H0I9 626 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 NUDT5Q9UKK9 219 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 DSEQ9UL01 958 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 SPATA2Q9UM82 520 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 DEPDC5O75140 1603 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 POMCP01189 267 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 CYP3A4P08684 503 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 DSG3P32926 999 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 GRIA4P48058 902 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ALFQ53S48 1182 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 AMIGO2Q86SJ2 522 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF570Q96NI8 536 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 FANCEQ9HB96 536 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 GTF2A1LQ9UNN4 478 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 FAM220BPB1ANY3 271 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 H3BN98 237 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 PDE9AO76083 593 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 EPHA3P29320 983 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 CCNFP41002 786 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ALDH9A1P49189 494 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ANXA11P50995 505 aaKnown RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 BROXQ5VW32 411 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 TRIQKQ629K1 86 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ANO7Q6IWH7 933 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ABRAXAS1Q6UWZ7 409 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ATG14Q6ZNE5 492 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 CHMP1BQ7LBR1 199 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 NIPA1Q7RTP0 329 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 GSTCDQ8NEC7 633 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 NACC2Q96BF6 587 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms