RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 C16orf70Q9BSU1 422 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 EIF2AQ9BY44 585 aaKnown RBP5.96□□□□□ -1.46
SF3B3-214ENST00000572365 API5Q9BZZ5 524 aaKnown RBP5.96□□□□□ -1.46
SF3B3-214ENST00000572365 GJB4Q9NTQ9 266 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 CTTNBP2NLQ9P2B4 639 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 ANGPTL2Q9UKU9 493 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 MTF2Q9Y483 593 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-214ENST00000572365 CELSR3Q9NYQ7 3312 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 DCLK1O15075 740 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 GGPS1O95749 300 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 EPCAMP16422 314 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 TYRP1P17643 537 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 FGFR4P22455 802 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 IL1R2P27930 398 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 RARSP54136 660 aaKnown RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 OCA2Q04671 838 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 BOP1Q14137 746 aaKnown RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 ITPR1Q14643 2758 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 IQCB1Q15051 598 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 ZRSR2Q15696 482 aaKnown RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 PDCD4Q53EL6 469 aaKnown RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 INO80DQ53TQ3 878 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 C19orf48Q6RUI8 117 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 LRRC55Q6ZSA7 311 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 RPAP2Q8IXW5 612 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 YAF2Q8IY57 180 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 SYTL1Q8IYJ3 562 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 Q8NA96 180 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 PSD4Q8NDX1 1056 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 DNAJB3Q8WWF6 145 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 ATRIPQ8WXE1 791 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 SLC46A1Q96NT5 459 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 HEPHQ9BQS7 1158 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 KATNAL1Q9BW62 490 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 HELZ2Q9BYK8 2649 aaKnown RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 STK33Q9BYT3 514 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 UBA5Q9GZZ9 404 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 FAM49AQ9H0Q0 323 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 RANBP17Q9H2T7 1088 aaKnown RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 PPCSQ9HAB8 311 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 IL17RBQ9NRM6 502 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 ZNF212Q9UDV6 495 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 EIF2B4Q9UI10 523 aaKnown RBP5.95□□□□□ -1.46
SF3B3-214ENST00000572365 ITGB1BP2Q9UKP3 347 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 NEU2Q9Y3R4 380 aa5.95□□□□□ -1.46
SF3B3-214ENST00000572365 MYH15Q9Y2K3 1946 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 E7ENX8 843 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 HNRNPDLO14979 420 aaKnown RBP5.94□□□□□ -1.46
SF3B3-214ENST00000572365 ANP32CO43423 234 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 N4BP1O75113 896 aaKnown RBP5.94□□□□□ -1.46
SF3B3-214ENST00000572365 PPFIA4O75335 1185 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 VPS4BO75351 444 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 RASSF9O75901 435 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 CXCL14O95715 111 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 PROS1P07225 676 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 ATXN1LP0C7T5 689 aaKnown RBP5.94□□□□□ -1.46
SF3B3-214ENST00000572365 SPATA31D3P0C874 917 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 GOLGA8HP0CJ92 632 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 KCNA2P16389 499 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 TDO2P48775 406 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 TAP2Q03519 686 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 STXBP2Q15833 593 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 ALDH1L2Q3SY69 923 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 TUBB8Q3ZCM7 444 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 CELF3Q5SZQ8 465 aaKnown RBP5.94□□□□□ -1.46
SF3B3-214ENST00000572365 ARHGEF16Q5VV41 709 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 TAF2Q6P1X5 1199 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 ZDHHC24Q6UX98 284 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 TMEM184AQ6ZMB5 413 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 SPATA31D4Q6ZUB0 917 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 GDF7Q7Z4P5 450 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 TXLNBQ8N3L3 684 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 COLGALT1Q8NBJ5 622 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 NSUN7Q8NE18 718 aaKnown RBP5.94□□□□□ -1.46
SF3B3-214ENST00000572365 PPTC7Q8NI37 304 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 SSH3Q8TE77 659 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 ZNF483Q8TF39 744 aaPredicted RBP5.94□□□□□ -1.46
SF3B3-214ENST00000572365 APBB2Q92870 758 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 ZNF566Q969W8 418 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 RMDN3Q96TC7 470 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 HERPUD2Q9BSE4 406 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 VAT1LQ9HCJ6 419 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 PAG1Q9NWQ8 432 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 DLGAP2Q9P1A6 1054 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 MID2Q9UJV3 735 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 CAPN11Q9UMQ6 739 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 MAN2B2Q9Y2E5 1009 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 CEP83Q9Y592 693 aa5.94□□□□□ -1.46
SF3B3-214ENST00000572365 IGSF10Q6WRI0 2623 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 LOC102723971A0A1B0GUV8 181 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 AHRRA9YTQ3 701 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 CCP110O43303 1012 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 CREB3O43889 395 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 SOAT2O75908 522 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 RECQL4O94761 1208 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 SUN1O94901 812 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 INMTO95050 263 aa5.93□□□□□ -1.46
SF3B3-214ENST00000572365 GPANK1O95872 356 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms