RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ADHFE1Q8IWW8 467 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CCDC33Q8N5R6 958 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 ATP2A3Q93084 1043 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CELF6Q96J87 481 aaKnown RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 TMEM121Q9BTD3 319 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 LRRC1Q9BTT6 524 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 TXLNGYQ9BZA5 131 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 EBF3Q9H4W6 596 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 SLITRK6Q9H5Y7 841 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 PLAC1Q9HBJ0 212 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CD320Q9NPF0 282 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 PRKAG3Q9UGI9 489 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 LSM7Q9UK45 103 aaKnown RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 STARD13Q9Y3M8 1113 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 ZSCAN5CA6NGD5 496 aaPredicted RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 ADH5P11766 374 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 DYNLT1P63172 113 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 IL10RBQ08334 325 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 RUNX3Q13761 415 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 BYSLQ13895 437 aaKnown RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 KCNJ11Q14654 390 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 AAK1Q2M2I8 961 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 TXNDC11Q6PKC3 985 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 ZNF567Q8N184 647 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 OR7D4Q8NG98 312 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 ARRDC2Q8TBH0 407 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 FAM131CQ96AQ9 280 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 HAUS1Q96CS2 278 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 RPRD1AQ96P16 312 aaPredicted RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 MGME1Q9BQP7 344 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 NEUROG2Q9H2A3 272 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 GTSE1Q9NYZ3 720 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 SLC12A6Q9UHW9 1150 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 HS3ST2Q9Y278 367 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 KRIT1O00522 736 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 MATN3O15232 486 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 ADRA1AP35348 466 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 KIR2DL1P43626 348 aaPredicted RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 RGRP47804 291 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 SLC14A2Q15849 920 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 P3H1Q32P28 736 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 C2orf27AQ580R0 203 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 PITRM1Q5JRX3 1037 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CCDC137Q6PK04 289 aaKnown RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CCDC50Q8IVM0 306 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 DCAF4L2Q8NA75 395 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 TTC13Q8NBP0 860 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 DNASE1L2Q92874 299 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 ZNF599Q96NL3 588 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 PNKPQ96T60 521 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 DDX50Q9BQ39 737 aaKnown RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 MLPHQ9BV36 600 aaPredicted RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 BRD8Q9H0E9 1235 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 TMEM245Q9H330 911 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 DMGDHQ9UI17 866 aaKnown RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 VPS51Q9UID3 782 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 DUSP12Q9UNI6 340 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 NCAM2O15394 837 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 TTI1O43156 1089 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 METTL18O95568 372 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 HLA-DQB2P05538 268 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 ZSCAN5DPP0CG00 497 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 DESP17661 470 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 SSR1P43307 286 aaKnown RBP6.9□□□□□ -1.3
LINC00517-202ENST00000554257 EIF3EP60228 445 aaKnown RBP6.9□□□□□ -1.3
LINC00517-202ENST00000554257 SLC12A1Q13621 1099 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 DHX34Q14147 1143 aaKnown RBP6.9□□□□□ -1.3
LINC00517-202ENST00000554257 NAA30Q147X3 362 aaPredicted RBP6.9□□□□□ -1.3
LINC00517-202ENST00000554257 PLEKHG6Q3KR16 790 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 JAMLQ86YT9 394 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 LRRC49Q8IUZ0 686 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 ZNF592Q92610 1267 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 RNF34Q969K3 372 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 RPGRIP1Q96KN7 1286 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 TRIB3Q96RU7 358 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 AMACRQ9UHK6 382 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 GGA2Q9UJY4 613 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 RAB21Q9UL25 225 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 WDFY4Q6ZS81 3184 aa6.9□□□□□ -1.3
LINC00517-202ENST00000554257 TCRBV7S3A2A0A539 114 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 SLC9A3R1O14745 358 aaPredicted RBP6.9□□□□□ -1.31
LINC00517-202ENST00000554257 TULP3O75386 442 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 OR1E1P30953 314 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 RPL22P35268 128 aaKnown RBP6.9□□□□□ -1.31
LINC00517-202ENST00000554257 DRG2P55039 364 aaKnown RBP6.9□□□□□ -1.31
LINC00517-202ENST00000554257 CKAP4Q07065 602 aaKnown RBP6.9□□□□□ -1.31
LINC00517-202ENST00000554257 NIPAL4Q0D2K0 466 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 TMEM196Q5HYL7 178 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 RNASEH2BQ5TBB1 312 aaKnown RBP6.9□□□□□ -1.31
LINC00517-202ENST00000554257 FSTL4Q6MZW2 842 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 KDELC1Q6UW63 502 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 TPGS1Q6ZTW0 290 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 CCDC13Q8IYE1 715 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 CEP112Q8N8E3 955 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 NAT8LQ8N9F0 302 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 MAIP1Q8WWC4 291 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 P3H4Q92791 437 aa6.9□□□□□ -1.31
LINC00517-202ENST00000554257 TMA16Q96EY4 203 aaKnown RBP6.9□□□□□ -1.31
LINC00517-202ENST00000554257 NAP1L3Q99457 506 aaPredicted RBP6.9□□□□□ -1.31
LINC00517-202ENST00000554257 TRIM51Q9BSJ1 452 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms