RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ALOX15BO15296 676 aa18■□□□□ 0.47
PVT1-220ENST00000524165 LUC7L3O95232 432 aaKnown RBP18■□□□□ 0.47
PVT1-220ENST00000524165 CLDN2P57739 230 aa18■□□□□ 0.47
PVT1-220ENST00000524165 FZD2Q14332 565 aa18■□□□□ 0.47
PVT1-220ENST00000524165 DRAP1Q14919 205 aaPredicted RBP18■□□□□ 0.47
PVT1-220ENST00000524165 DEFB133Q30KQ1 61 aa18■□□□□ 0.47
PVT1-220ENST00000524165 NADSYN1Q6IA69 706 aa18■□□□□ 0.47
PVT1-220ENST00000524165 MSANTD2Q6P1R3 559 aa18■□□□□ 0.47
PVT1-220ENST00000524165 PARGQ86W56 976 aa18■□□□□ 0.47
PVT1-220ENST00000524165 HORMAD1Q86X24 394 aa18■□□□□ 0.47
PVT1-220ENST00000524165 APCDD1Q8J025 514 aa18■□□□□ 0.47
PVT1-220ENST00000524165 SPATA20Q8TB22 786 aa18■□□□□ 0.47
PVT1-220ENST00000524165 HEXIM2Q96MH2 286 aaKnown RBP18■□□□□ 0.47
PVT1-220ENST00000524165 IL12RB2Q99665 862 aa18■□□□□ 0.47
PVT1-220ENST00000524165 CCDC3Q9BQI4 270 aa18■□□□□ 0.47
PVT1-220ENST00000524165 TNMDQ9H2S6 317 aa18■□□□□ 0.47
PVT1-220ENST00000524165 PCDHB11Q9Y5F2 797 aa18■□□□□ 0.47
PVT1-220ENST00000524165 HS3ST3A1Q9Y663 406 aa18■□□□□ 0.47
PVT1-220ENST00000524165 A0A087X0B3 334 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 SPTY2D1-AS1A0A0U1RR47 76 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 CASC3O15234 703 aaKnown RBP17.99■□□□□ 0.47
PVT1-220ENST00000524165 EIF5BO60841 1220 aaKnown RBP17.99■□□□□ 0.47
PVT1-220ENST00000524165 HLA-DRAP01903 254 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 CD58P19256 250 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 PIK3CAP42336 1068 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 POLE2P56282 527 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 DLG4P78352 724 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 B3GNT8Q7Z7M8 397 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 DTX1Q86Y01 620 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 ANKRD52Q8NB46 1076 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 MYEOVQ96EZ4 313 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 CLIC6Q96NY7 704 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 BACH2Q9BYV9 841 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 PANK2Q9BZ23 570 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 IMPG2Q9BZV3 1241 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 UNC13CQ8NB66 2214 aa17.99■□□□□ 0.47
PVT1-220ENST00000524165 CELSR2Q9HCU4 2923 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 YJEFN3A6XGL0 299 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 E7ENQ6 273 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 IKBKBO14920 756 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 JMJD7P0C870 316 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 CD97P48960 835 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 VASPP50552 380 aaPredicted RBP17.98■□□□□ 0.47
PVT1-220ENST00000524165 SULT2A1Q06520 285 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 SLC12A1Q13621 1099 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 PIP5KL1Q5T9C9 394 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 ARHGAP17Q68EM7 881 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 PTAR1Q7Z6K3 402 aaPredicted RBP17.98■□□□□ 0.47
PVT1-220ENST00000524165 SLC35F3Q8IY50 421 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 MIB2Q96AX9 1013 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 BMFQ96LC9 184 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 IPO9Q96P70 1041 aaKnown RBP17.98■□□□□ 0.47
PVT1-220ENST00000524165 SLC12A9Q9BXP2 914 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 NIF3L1Q9GZT8 377 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 SYNDIG1Q9H7V2 258 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 PLAAQ9Y263 795 aa17.98■□□□□ 0.47
PVT1-220ENST00000524165 RP1L1Q8IWN7 2480 aaPredicted RBP17.98■□□□□ 0.47
PVT1-220ENST00000524165 A0A1W2PQ27 194 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 A0A1W2PQ64 194 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 A0A1W2PQC6 194 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 MCF2LO15068 1137 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 HGFP14210 728 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 GJB2P29033 226 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 CCKBRP32239 447 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 CCDC15Q0P6D6 951 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 ZNF394Q53GI3 561 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 MS4A13Q5J8X5 152 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 CRYBG3Q68DQ2 2970 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 OR6B2Q6IFH4 312 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 KYAT3Q6YP21 454 aaKnown RBP17.97■□□□□ 0.47
PVT1-220ENST00000524165 ATCAYQ86WG3 371 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 CFAP52Q8N1V2 620 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 SCML4Q8N228 414 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 GOLGA5Q8TBA6 731 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 TMC2Q8TDI7 906 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 LMX1AQ8TE12 382 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 LRRC4Q9HBW1 653 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 APOBEC3GQ9HC16 384 aaKnown RBP17.97■□□□□ 0.47
PVT1-220ENST00000524165 TMPRSS4Q9NRS4 437 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 KBTBD4Q9NVX7 518 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 PISDQ9UG56 409 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 KLF15Q9UIH9 416 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 CLIC4Q9Y696 253 aa17.97■□□□□ 0.47
PVT1-220ENST00000524165 PRAMEF33A0A0G2JMD5 474 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 D6RAR5 112 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 XPO1O14980 1071 aaKnown RBP17.96■□□□□ 0.47
PVT1-220ENST00000524165 PRAMEF10O60809 474 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 JUNDP17535 347 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 CD82P27701 267 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 TBX4P57082 545 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 ADIGQ0VDE8 80 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 KNOP1Q1ED39 458 aaKnown RBP17.96■□□□□ 0.47
PVT1-220ENST00000524165 DCAF6Q58WW2 860 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 CNNM4Q6P4Q7 775 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 ZFAND4Q86XD8 727 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 TMEM174Q8WUU8 243 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 BTN2A2Q8WVV5 523 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 TMEM74Q96NL1 305 aa17.96■□□□□ 0.47
PVT1-220ENST00000524165 GFM1Q96RP9 751 aaKnown RBP17.96■□□□□ 0.47
PVT1-220ENST00000524165 PADI4Q9UM07 663 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms