RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 RPS6KL1Q9Y6S9 549 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 SVEP1Q4LDE5 3571 aa6.82□□□□□ -1.32
HDAC3-206ENST00000471968 ANK3Q12955 4377 aaKnown RBP6.82□□□□□ -1.32
HDAC3-206ENST00000471968 PIPSLA2A3N6 862 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 POM121BA6NF01 834 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 GABRDO14764 452 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 SLC7A4O43246 635 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 STC2O76061 302 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 CELA2BP08218 269 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 PDGFRBP09619 1106 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 SPATA31C1P0DKV0 1188 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 GCFC2P16383 781 aaKnown RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 TSHRP16473 764 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 PLCG1P19174 1290 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 MZF1P28698 734 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 DLSTP36957 453 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 PNPLA4P41247 253 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 ABL2P42684 1182 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 SLC5A3P53794 718 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 AKAP17AQ02040 695 aaKnown RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 Q0VFX4 171 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 GNL2Q13823 731 aaKnown RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 PDE1CQ14123 709 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 MDH1BQ5I0G3 518 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 DUS1LQ6P1R4 473 aaKnown RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 ZPBP2Q6X784 338 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 SPRED1Q7Z699 444 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 NEK8Q86SG6 692 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 PIM3Q86V86 326 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 SFR1Q86XK3 245 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 PCDH19Q8TAB3 1148 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 RTP4Q96DX8 246 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 BICD1Q96G01 975 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 CCDC120Q96HB5 630 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 BMFQ96LC9 184 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 CCDC74BQ96LY2 380 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 BARD1Q99728 777 aaKnown RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 CTRCQ99895 268 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 SPRY4Q9C004 299 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 ZNF518BQ9C0D4 1074 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 CLPBQ9H078 707 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 GPR27Q9NS67 375 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 SUCOQ9UBS9 1254 aaKnown RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 NUDT5Q9UKK9 219 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 CDH9Q9ULB4 789 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 NAP1L2Q9ULW6 460 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-206ENST00000471968 ZNF510Q9Y2H8 683 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 DERAQ9Y315 318 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 PCDHGB7Q9Y5F8 929 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 SNX9Q9Y5X1 595 aa6.81□□□□□ -1.32
HDAC3-206ENST00000471968 IGHV5-10-1A0A0J9YXX1 117 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 ARGFXA6NJG6 315 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 FAM171A2A8MVW0 826 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 TTC34A8MYJ7 566 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 F5H423 210 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 M0R2N6 131 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 TULP1O00294 542 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 SPINT1O43278 529 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 SPRY1O43609 319 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 FAM189A1O60320 539 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 MED24O75448 989 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 STK17BO94768 372 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 HMBSP08397 361 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 HOXD9P28356 352 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 POLR2BP30876 1174 aaKnown RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 CORO1AP31146 461 aaKnown RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 RBMXP38159 391 aaKnown RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 PLA2G4AP47712 749 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 GLRBP48167 497 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 RAB15P59190 212 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 FOLH1Q04609 750 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 EIF2B5Q13144 721 aaKnown RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 KYAT1Q16773 422 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 ZNF284Q2VY69 593 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 AMZ1Q400G9 498 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 CRB2Q5IJ48 1285 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 TPRG1LQ5T0D9 272 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 AGBL4Q5VU57 503 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 TMEM200AQ86VY9 491 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 PHACTR4Q8IZ21 702 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 BLIDQ8IZY5 108 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 AGBL5Q8NDL9 886 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 WFDC11Q8NEX6 87 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 OR6C4Q8NGE1 309 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 MYCBPAPQ8TBZ2 947 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 FAM131CQ96AQ9 280 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 KCNK16Q96T55 309 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 ILKAPQ9H0C8 392 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 TRIT1Q9H3H1 467 aaKnown RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 OCIAD1Q9NX40 245 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 APPL1Q9UKG1 709 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 AGO1Q9UL18 857 aaKnown RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 C2CD2Q9Y426 696 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 RBM19Q9Y4C8 960 aaKnown RBP6.8□□□□□ -1.32
HDAC3-206ENST00000471968 MYO7BQ6PIF6 2116 aa6.8□□□□□ -1.32
HDAC3-206ENST00000471968 AKAP6Q13023 2319 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 A0A0G2JK05 382 aa6.79□□□□□ -1.32
HDAC3-206ENST00000471968 KLF18A0A0U1RQI7 1052 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms