RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 LMLNQ96KR4 655 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 LRRC3BQ96PB8 259 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 PPP1R2P1Q96PQ5 205 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 FRMD8Q9BZ67 464 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 PHACTR1Q9C0D0 580 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ARGLU1Q9NWB6 273 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 CLDND1Q9NY35 253 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ASIC3Q9UHC3 531 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 FARP1Q9Y4F1 1045 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-208ENST00000469529 TTC28Q96AY4 2481 aa13.04□□□□□ -0.32
TRAF4-208ENST00000469529 ERI2A8K979 691 aaKnown RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 PRAMEF11O60813 436 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 TBL1XO60907 577 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 IFNB1P01574 187 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 LAMP2P13473 410 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 CCNB1P14635 433 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 FCARP24071 287 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 PTPN3P26045 913 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 HOXD9P28356 352 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 SGSHP51688 502 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 SLC20A2Q08357 652 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 AP1B1Q10567 949 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 GPS1Q13098 491 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 RFTN1Q14699 578 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 INO80DQ53TQ3 878 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 RNASEH2BQ5TBB1 312 aaKnown RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 TFAP2DQ7Z6R9 452 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 KIAA0907Q7Z7F0 614 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 MFSD6LQ8IWD5 586 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 ATPAF2Q8N5M1 289 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 RIN3Q8TB24 985 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 CAVIN3Q969G5 261 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 ACDQ96AP0 544 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 HMCESQ96FZ2 354 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 CELF6Q96J87 481 aaKnown RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 FAM83CQ9BQN1 747 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 FEM1AQ9BSK4 669 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 SMG9Q9H0W8 520 aaKnown RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 LINC00597Q9H2U6 94 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 C10orf88Q9H8K7 445 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 SPHK2Q9NRA0 654 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 THG1LQ9NWX6 298 aaKnown RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 KIAA1522Q9P206 1035 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-208ENST00000469529 EPS15L1Q9UBC2 864 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 SHOC2Q9UQ13 582 aa13.03□□□□□ -0.32
TRAF4-208ENST00000469529 ESYT3A0FGR9 886 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 H3BQ06 376 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-208ENST00000469529 RNF103O00237 685 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 DFFAO00273 331 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 CHADO15335 359 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 TSPAN3O60637 253 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ECI2O75521 394 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 MAP3K6O95382 1288 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 RHOCP08134 193 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ZSCAN5DPP0CG00 497 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ETS1P14921 441 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 CES1P23141 567 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-208ENST00000469529 CLCN6P51797 869 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 SEMA5AQ13591 1074 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 DMC1Q14565 340 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 PDGFRLQ15198 375 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 EML3Q32P44 896 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 SPDYCQ5MJ68 293 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 BEND6Q5SZJ8 279 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ITPRIPL1Q6GPH6 555 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 CEP128Q6ZU80 1094 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 TMEM25Q86YD3 366 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 CCDC117Q8IWD4 279 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-208ENST00000469529 PPIL6Q8IXY8 311 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ZNF567Q8N184 647 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 CNTD1Q8N815 330 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRAF4-208ENST00000469529 NAT8LQ8N9F0 302 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 MCUQ8NE86 351 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 DDI1Q8WTU0 396 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 IFT81Q8WYA0 676 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ING5Q8WYH8 240 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 CPT1BQ92523 772 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 EXOC4Q96A65 974 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ELSPBP1Q96BH3 223 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 RSPRY1Q96DX4 576 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 PDFQ9HBH1 243 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ZFP14Q9HCL3 533 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 EIF2B3Q9NR50 452 aaKnown RBP13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ANAPC5Q9UJX4 755 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 ATP8A1Q9Y2Q0 1164 aa13.02□□□□□ -0.33
TRAF4-208ENST00000469529 DENND4CQ5VZ89 1909 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 A0A0D9SEW6 157 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 HEPACAM2A8MVW5 462 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 H0Y626 953 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 TRDMT1O14717 391 aaKnown RBP13.01□□□□□ -0.33
TRAF4-208ENST00000469529 PSMD3O43242 534 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 HOXC11O43248 304 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-208ENST00000469529 ZMPSTE24O75844 475 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 JCHAINP01591 159 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 MYBL2P10244 700 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 TPSB2P20231 275 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 VIPR2P41587 438 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms