RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 GJD2Q9UKL4 321 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 TTC24A2A3L6 582 aaPredicted RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 MTA2O94776 668 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 JCHAINP01591 159 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 PTPN1P18031 435 aaKnown RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 BGNP21810 368 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 IVDP26440 423 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 AVPR1AP37288 418 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 BCAP31P51572 246 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 PRKCZQ05513 592 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 TAF12Q16514 161 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 GRAMD2AQ8IUY3 354 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 GALNT4Q8N4A0 578 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 SLC25A41Q8N5S1 370 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 TMEM209Q96SK2 561 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 FERMT1Q9BQL6 677 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 PAIP1Q9H074 479 aaKnown RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 AGO3Q9H9G7 860 aaKnown RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 PLGRKTQ9HBL7 147 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 FER1L6Q2WGJ9 1857 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 A6NL46 340 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 FAM47E-STBD1D6RA91 191 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 TNFRSF10AO00220 468 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 CNOT3O75175 753 aaKnown RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 ASGR1P07306 291 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 T-ENOLP0DO92 83 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 RPL5P46777 297 aaKnown RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 TAP1Q03518 808 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 BST2Q10589 180 aaKnown RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 TGFBIQ15582 683 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 GDF6Q6KF10 455 aaPredicted RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 DEFB128Q7Z7B8 93 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 CROCCP3Q8IVE0 287 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 MYO1HQ8N1T3 1032 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 PLD5Q8N7P1 536 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 PPP4R1Q8TF05 950 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 GID8Q9NWU2 228 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 SCHIP1Q9P0W5 487 aaPredicted RBP12.58□□□□□ -0.4
USP11-206ENST00000469080 SLC27A5Q9Y2P5 690 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 ATAD5Q96QE3 1844 aa12.58□□□□□ -0.4
USP11-206ENST00000469080 YJEFN3A6XGL0 299 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 TSPAN3O60637 253 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 METTL18O95568 372 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 MGAT1P26572 445 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 GRM5P41594 1212 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 GLRBP48167 497 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 ATXN3P54252 364 aaPredicted RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 BCAT1P54687 386 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 CSE1LP55060 971 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 HADHBP55084 474 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 SLC25A11Q02978 314 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 KLF1Q13351 362 aaPredicted RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 C6orf163Q5TEZ5 329 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 MFSD14CQ5VZR4 134 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 RYBPQ8N488 228 aaPredicted RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 SPATA6LQ8N4H0 392 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PDZD8Q8NEN9 1154 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 ZFP28Q8NHY6 868 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 CKAP2Q8WWK9 683 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PABPC5Q96DU9 382 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 SCYL1Q96KG9 808 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 ARMCX1Q9P291 453 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 C2CD4BA6NLJ0 364 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 APOC4-APOC2K7ER74 178 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 APOC2P02655 101 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 ERVK-10P10266 1014 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 PSMB4P28070 264 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 YWHAZP63104 245 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 DDR2Q16832 855 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 ZNF423Q2M1K9 1284 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 DCAF4L1Q3SXM0 396 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 ZCCHC9Q8N567 271 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 COLGALT1Q8NBJ5 622 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 IPMKQ8NFU5 416 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 RAET1EQ8TD07 263 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PDCD6IPQ8WUM4 868 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 WNT8BQ93098 351 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 SERPINB12Q96P63 405 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 SEPT5Q99719 369 aaPredicted RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 MIPEPQ99797 713 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PRDM12Q9H4Q4 367 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PCDH9Q9HC56 1237 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PSMC3IPQ9P2W1 217 aaPredicted RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 ANKRD34BA5PLL1 514 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 NRP1O14786 923 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 HSPA1AP0DMV8 641 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 HSPA1BP0DMV9 641 aaKnown RBP12.57□□□□□ -0.4
USP11-206ENST00000469080 CPB1P15086 417 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 MTFR1Q15390 333 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 CRY1Q16526 586 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 BOLA3Q53S33 107 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 CGB2Q6NT52 195 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PRR23CQ6ZRP0 262 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 ACAD11Q709F0 780 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 CYP3A43Q9HB55 503 aa12.57□□□□□ -0.4
USP11-206ENST00000469080 FAM105AQ9NUU6 356 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms