RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 UNC5AQ6ZN44 842 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 TIFABQ6ZNK6 161 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 GPR152Q8TDT2 470 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 NDRG1Q92597 394 aaKnown RBP16.06■□□□□ 0.16
TVP23C-203ENST00000428082 CDKL2Q92772 493 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 UTP4Q969X6 686 aaKnown RBP16.06■□□□□ 0.16
TVP23C-203ENST00000428082 NSL1Q96IY1 281 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 CSPG4P5Q96PW8 444 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 NAT9Q9BTE0 207 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 EIF2B3Q9NR50 452 aaKnown RBP16.06■□□□□ 0.16
TVP23C-203ENST00000428082 HEY2Q9UBP5 337 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 DCTN4Q9UJW0 460 aa16.06■□□□□ 0.16
TVP23C-203ENST00000428082 TRANK1O15050 2925 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 GREB1Q4ZG55 1949 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 BIRC5O15392 142 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 SPATA31D3P0C874 917 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 BGNP21810 368 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 CALB2P22676 271 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 SLC5A3P53794 718 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 SMAD3P84022 425 aaKnown RBP16.05■□□□□ 0.16
TVP23C-203ENST00000428082 STXBP5Q5T5C0 1151 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 SPATA31D4Q6ZUB0 917 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 PRPF39Q86UA1 669 aaKnown RBP16.05■□□□□ 0.16
TVP23C-203ENST00000428082 SIX6OS1Q8N1H7 587 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 RFWD2Q8NHY2 731 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 SCAMP5Q8TAC9 235 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 ACMSDQ8TDX5 336 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 GDPD5Q8WTR4 605 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 SIGLEC10Q96LC7 697 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 TMEM120AQ9BXJ8 343 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 ULBP1Q9BZM6 244 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 CYP4F11Q9HBI6 524 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 BATF3Q9NR55 127 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 KCNK4Q9NYG8 393 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 L3MBTL1Q9Y468 752 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 MAD1L1Q9Y6D9 718 aa16.05■□□□□ 0.16
TVP23C-203ENST00000428082 MYO9BQ13459 2157 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 A0A0A0MRY4 1105 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 TGM5O43548 720 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 PIAS1O75925 651 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 ADH1AP07327 375 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 ATF6P18850 670 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 CRHR1P34998 444 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 MATKP42679 507 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 OVGP1Q12889 678 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 CTC1Q2NKJ3 1217 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 ARHGAP24Q8N264 748 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 NSMCE1Q8WV22 266 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 HTR3CQ8WXA8 447 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 N4BP2L2Q92802 583 aaPredicted RBP16.04■□□□□ 0.16
TVP23C-203ENST00000428082 PTPRN2Q92932 1015 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 SKA1Q96BD8 255 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 SPATA13Q96N96 652 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 KCTD15Q96SI1 283 aaPredicted RBP16.04■□□□□ 0.16
TVP23C-203ENST00000428082 SIKE1Q9BRV8 207 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 EMILIN2Q9BXX0 1053 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 RNPEPL1Q9HAU8 725 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 ZNF638Q14966 1978 aaKnown RBP16.04■□□□□ 0.16
TVP23C-203ENST00000428082 MYO16Q9Y6X6 1858 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 A8MUI8 341 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 H3BRJ5 948 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 DLDP09622 509 aaKnown RBP16.04■□□□□ 0.16
TVP23C-203ENST00000428082 USP17L7P0C7H9 530 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 MRPS5P82675 430 aaKnown RBP16.04■□□□□ 0.16
TVP23C-203ENST00000428082 GBE1Q04446 702 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 IFRD2Q12894 506 aaPredicted RBP16.04■□□□□ 0.16
TVP23C-203ENST00000428082 SLC25A52Q3SY17 297 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 FAXCQ5TGI0 409 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 FAM13CQ8NE31 585 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 DEPDC1BQ8WUY9 529 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 E2F7Q96AV8 911 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 BTBD10Q9BSF8 475 aa16.04■□□□□ 0.16
TVP23C-203ENST00000428082 COL4A4P53420 1690 aaPredicted RBP16.03■□□□□ 0.16
TVP23C-203ENST00000428082 RFXAPO00287 272 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 OPHN1O60890 802 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 DAB1O75553 588 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 RFPL1O75677 317 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 CBX6O95503 412 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 METTL18O95568 372 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 TUFMP49411 452 aaKnown RBP16.03■□□□□ 0.16
TVP23C-203ENST00000428082 RPL10AP62906 217 aaKnown RBP16.03■□□□□ 0.16
TVP23C-203ENST00000428082 SYCP2LQ5T4T6 812 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 STEAP4Q687X5 459 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 LILRA6Q6PI73 481 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 KYAT3Q6YP21 454 aaKnown RBP16.03■□□□□ 0.16
TVP23C-203ENST00000428082 NUDCD3Q8IVD9 361 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 TCEAL8Q8IYN2 117 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 GIPC2Q8TF65 315 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 OLFM3Q96PB7 478 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 WWP1Q9H0M0 922 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 CNGB3Q9NQW8 809 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 MTMR10Q9NXD2 777 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 HSFX1Q9UBD0 423 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 FZD10Q9ULW2 581 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 STAP1Q9ULZ2 295 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 USP3Q9Y6I4 520 aa16.03■□□□□ 0.16
TVP23C-203ENST00000428082 MTCL1Q9Y4B5 1905 aaKnown RBP16.03■□□□□ 0.16
TVP23C-203ENST00000428082 SDR42E2A6NKP2 422 aa16.02■□□□□ 0.16
TVP23C-203ENST00000428082 CXorf49A8MYA2 514 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms