RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 HDAC11Q96DB2 347 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 ZNF419Q96HQ0 510 aaPredicted RBP15.04■□□□□ -0
CXCL12-201ENST00000343575 KDM4CQ9H3R0 1056 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 PIDD1Q9HB75 910 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 FAM114A2Q9NRY5 505 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 DZANK1Q9NVP4 752 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 MRPS23Q9Y3D9 190 aaKnown RBP15.04■□□□□ -0
CXCL12-201ENST00000343575 XIRP2A4UGR9 3374 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 SHROOM3Q8TF72 1996 aa15.04■□□□□ -0
CXCL12-201ENST00000343575 TSPAN3O60637 253 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 MAFKO60675 156 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 PPP2R2AP63151 447 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 GPS1Q13098 491 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 ARHGAP15Q53QZ3 475 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 RHBDF2Q6PJF5 856 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 LZTR1Q8N653 840 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 CCDC110Q8TBZ0 833 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 HTR3CQ8WXA8 447 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 ART4Q93070 314 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 LRRC3BQ96PB8 259 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 TDP1Q9NUW8 608 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 CFAP69A5D8W1 941 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 KCNK1O00180 336 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 SOX1O00570 391 aaPredicted RBP15.03■□□□□ -0
CXCL12-201ENST00000343575 ZNF197O14709 1029 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 NCAM2O15394 837 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 DNAJC8O75937 253 aaPredicted RBP15.03■□□□□ -0
CXCL12-201ENST00000343575 HSD17B3P37058 310 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 AVPR1AP37288 418 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 ADCY8P40145 1251 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 AP1B1Q10567 949 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 P3H1Q32P28 736 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 GKAP1Q5VSY0 366 aaPredicted RBP15.03■□□□□ -0
CXCL12-201ENST00000343575 CROCCP2Q86T23 111 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 ARID3BQ8IVW6 561 aaPredicted RBP15.03■□□□□ -0
CXCL12-201ENST00000343575 CCNYQ8ND76 341 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 TTC16Q8NEE8 873 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 PPP2R3CQ969Q6 453 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 SNF8Q96H20 258 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 TSGA13Q96PP4 275 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 WHRNQ9P202 907 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 MTCH2Q9Y6C9 303 aa15.03■□□□□ -0
CXCL12-201ENST00000343575 MYO18AQ92614 2054 aaKnown RBP15.03■□□□□ -0
CXCL12-201ENST00000343575 EYSQ5T1H1 3165 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 A0A1W2PPC1 479 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 DFFAO00273 331 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 PPP1R12AO14974 1030 aaPredicted RBP15.02■□□□□ -0
CXCL12-201ENST00000343575 GCATO75600 419 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 PAPOLAP51003 745 aaKnown RBP15.02■□□□□ -0
CXCL12-201ENST00000343575 NDST2P52849 883 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 ITGA8P53708 1063 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 SEC24CP53992 1094 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 PLTPP55058 493 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 CDH4P55283 916 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 HLTFQ14527 1009 aaKnown RBP eCLIP15.02■□□□□ -0
CXCL12-201ENST00000343575 ZNF77Q15935 545 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 CTC1Q2NKJ3 1217 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 HEATR6Q6AI08 1181 aaKnown RBP15.02■□□□□ -0
CXCL12-201ENST00000343575 CYB5D1Q6P9G0 228 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 NPAS3Q8IXF0 933 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 TAB3Q8N5C8 712 aaPredicted RBP15.02■□□□□ -0
CXCL12-201ENST00000343575 RSPRY1Q96DX4 576 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 HMCESQ96FZ2 354 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 CEP41Q9BYV8 373 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 S1PR5Q9H228 398 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 LMCD1Q9NZU5 365 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 SUFUQ9UMX1 484 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 NFS1Q9Y697 457 aa15.02■□□□□ -0
CXCL12-201ENST00000343575 BRWD1Q9NSI6 2320 aa15.02□□□□□ -0.01
CXCL12-201ENST00000343575 E2F8A0AVK6 867 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 DNALI1O14645 258 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 TBX10O75333 385 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 METTL18O95568 372 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 PEX11BO96011 259 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 GSTA1P08263 222 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 ITIH2P19823 946 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 MX2P20592 715 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 PTPN3P26045 913 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 OR1E1P30953 314 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 LTBRP36941 435 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 MAPKAPK2P49137 400 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 ZBTB17Q13105 803 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 RNASEH2BQ5TBB1 312 aaKnown RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 HIBCHQ6NVY1 386 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 CCHCR1Q8TD31 782 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 CPT1BQ92523 772 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 SEC16BQ96JE7 1060 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 BRD8Q9H0E9 1235 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 SH3BP1Q9Y3L3 701 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 DOCK8Q8NF50 2099 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 MYOFQ9NZM1 2061 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-201ENST00000343575 A0A0D9SEW6 157 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 TCRBV7S3A2A0A539 114 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 RASA4BC9J798 803 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 RNF103O00237 685 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 RASA4O43374 803 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 TCF3P15923 654 aa15.01□□□□□ -0.01
CXCL12-201ENST00000343575 MLLT1Q03111 559 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms