RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 LRPAP1P30533 357 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 GABRB2P47870 512 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 CCNG1P51959 295 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 SWT1Q5T5J6 900 aaKnown RBP17.5■□□□□ 0.39
GABRB3-202ENST00000311550 IQSEC1Q6DN90 963 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 ZFP1Q6P2D0 407 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 LGI2Q8N0V4 545 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 GPR20Q99678 358 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 ACTR8Q9H981 624 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 SEMA4BQ9NPR2 832 aaPredicted RBP17.5■□□□□ 0.39
GABRB3-202ENST00000311550 TEKT2Q9UIF3 430 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 HNRNPCL2B2RXH8 293 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 H7C4K7 107 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 MTA2O94776 668 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 TNFAIP8O95379 198 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 CD86P42081 329 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 HADHBP55084 474 aaKnown RBP17.49■□□□□ 0.39
GABRB3-202ENST00000311550 FSCN1Q16658 493 aaKnown RBP17.49■□□□□ 0.39
GABRB3-202ENST00000311550 C1orf127Q8N9H9 656 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 MTG1Q9BT17 334 aaPredicted RBP17.49■□□□□ 0.39
GABRB3-202ENST00000311550 GRIP2Q9C0E4 1043 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 CILPO75339 1184 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 CPSF4O95639 269 aaKnown RBP17.49■□□□□ 0.39
GABRB3-202ENST00000311550 PLD5Q8N7P1 536 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 GSTCDQ8NEC7 633 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 TRAPPC9Q96Q05 1148 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 TINF2Q9BSI4 451 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 SLC25A23Q9BV35 468 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 RAD54BQ9Y620 910 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 NEK2P51955 445 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 PFKFB4Q16877 469 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 C11orf74Q86VG3 221 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 ACMSDQ8TDX5 336 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 KLRG1Q96E93 195 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 NSMCE2Q96MF7 247 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 SYNCRIPO60506 623 aaKnown RBP17.49■□□□□ 0.39
GABRB3-202ENST00000311550 BPGMP07738 259 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 YWHAQP27348 245 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 ARL2P36404 184 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 GLT6D1Q7Z4J2 308 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 RNF145Q96MT1 663 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 DHX33Q9H6R0 707 aaKnown RBP17.49■□□□□ 0.39
GABRB3-202ENST00000311550 NRCAMQ92823 1304 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 FAM182AQ5T1J6 154 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 TMEM86AQ8N2M4 240 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 METTL6Q8TCB7 284 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 CLPTM1LQ96KA5 538 aa17.49■□□□□ 0.39
GABRB3-202ENST00000311550 BIRC5O15392 142 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 CLOCKO15516 846 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 VAC14Q08AM6 782 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 WASHC5Q12768 1159 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 C11orf96Q7Z7L8 435 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 DHDDSQ86SQ9 333 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 ZMYM5Q9UJ78 669 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 PLLPQ9Y342 182 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 UNGP13051 313 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 ATP6V1C1P21283 382 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 PRIM2P49643 509 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 GDF10P55107 478 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 UBE3AQ05086 875 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 SLC44A2Q8IWA5 706 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 XPR1Q9UBH6 696 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 A0A087X1B8 175 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 GSC2O15499 205 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 PGM3O95394 542 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 HNRNPLP14866 589 aaKnown RBP eCLIP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 MSX2P35548 267 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 MRPS5P82675 430 aaKnown RBP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 PTP4A2Q12974 167 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 SAMD4BQ5PRF9 694 aaKnown RBP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 ADAM2Q99965 735 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 TRIM45Q9H8W5 580 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 CCDC154A6NI56 674 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 ZNF839A8K0R7 811 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 CERCAMQ5T4B2 595 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 DDHD1Q8NEL9 900 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 FAM120BQ96EK7 910 aaKnown RBP17.48■□□□□ 0.39
GABRB3-202ENST00000311550 CSPG4P5Q96PW8 444 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 ELOVL6Q9H5J4 265 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 ABCC13Q9NSE7 274 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 POLG2Q9UHN1 485 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 ADAM28Q9UKQ2 775 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 TRPV2Q9Y5S1 764 aa17.48■□□□□ 0.39
GABRB3-202ENST00000311550 GRM5P41594 1212 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 MAPK10P53779 464 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 MAXP61244 160 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 TRIM60Q495X7 471 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 RMND5AQ9H871 391 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 NMRK1Q9NWW6 199 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 ALDH2P05091 517 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 FCGR1AP12314 374 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 NEDD8Q15843 81 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 LCLAT1Q6UWP7 414 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 FAM126BQ8IXS8 530 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 TMCO5AQ8N6Q1 288 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 RCN3Q96D15 328 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 PARP4Q9UKK3 1724 aaKnown RBP17.47■□□□□ 0.39
GABRB3-202ENST00000311550 ATP6AP2A0A1C7CYW4 349 aa17.47■□□□□ 0.39
GABRB3-202ENST00000311550 ATP6AP2O75787 350 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms