RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 OR6A2O95222 327 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 RPL6Q02878 288 aaKnown RBP11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 DPP9Q86TI2 863 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 CATSPERBQ9H7T0 1116 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 KIAA1586Q9HCI6 787 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF609O15014 1411 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 ALDH9A1P49189 494 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 GPR139Q6DWJ6 353 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 IL31Q6EBC2 164 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 CNOT7Q9UIV1 285 aaKnown RBP11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 PLIN3O60664 434 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 TGM2P21980 687 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 SKIV2L2P42285 1042 aaKnown RBP11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 MYBPC1Q00872 1141 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 PDK3Q15120 406 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 EZH2Q15910 746 aaKnown RBP11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 INTS11Q5TA45 600 aaKnown RBP11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 WDR59Q6PJI9 974 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 SPPL2AQ8TCT8 520 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 APOL2Q9BQE5 337 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 GPR63Q9BZJ6 419 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 TREM1Q9NP99 234 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 MTMR10Q9NXD2 777 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 FARSAQ9Y285 508 aaKnown RBP11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 CENPBD1B2RD01 187 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC1A6P48664 564 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 MCFD2Q8NI22 146 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 OXCT2Q9BYC2 517 aaPredicted RBP11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 WHRNQ9P202 907 aa11.35□□□□□ -0.59
HDGFL3-201ENST00000299633 CCNT2O60583 730 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 RFX7Q2KHR2 1363 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 SAMD4BQ5PRF9 694 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 C6orf183Q5T699 404 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 RIPOR1Q6ZS17 1223 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 TRIM43Q96BQ3 446 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 CDH9Q9ULB4 789 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 PIK3CBP42338 1070 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 MECP2P51608 486 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 MCL1Q07820 350 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 SPDYCQ5MJ68 293 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 FAM171BQ6P995 826 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF717Q9BY31 904 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 IKZF3Q9UKT9 509 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 IFRD1O00458 451 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 CYP2C8P10632 490 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 PHACTR4Q8IZ21 702 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 ZSCAN18Q8TBC5 510 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 DCAF4Q8WV16 495 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 TMBIM4Q9HC24 238 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 RDH8Q9NYR8 311 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC16A4O15374 487 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 RTN2O75298 545 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC10A7Q0GE19 358 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 TRIT1Q9H3H1 467 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 LRRC40Q9H9A6 602 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 N6AMT1Q9Y5N5 214 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 DUSP10Q9Y6W6 482 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 PRELPP51888 382 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 CWF19L1Q69YN2 538 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF540Q8NDQ6 660 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 IFT46Q9NQC8 304 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 FAM228BP0C875 321 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 CDC42P60953 191 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 FRG1Q14331 258 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 SLC44A5Q8NCS7 719 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 CCDC54Q8NEL0 328 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 OR2L3Q8NG85 312 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 AASDHPPTQ9NRN7 309 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 PI4KBQ9UBF8 816 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 H3BNX3 289 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 RAD17O75943 681 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 EIF5AP63241 154 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 PPP2R2BQ00005 443 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 STOML3Q8TAV4 291 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 VTI1BQ9UEU0 232 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 SQORQ9Y6N5 450 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 VCLP18206 1134 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 ARFIP1P53367 373 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 AGAP11Q8TF27 550 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 GALK1P51570 392 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 KCNJ2P63252 427 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 BTBD8Q5XKL5 378 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 ZNF772Q68DY9 489 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 C4orf22Q6V702 233 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 ZZZ3Q8IYH5 903 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 ING5Q8WYH8 240 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 NEUROD4Q9HD90 331 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 ENPEPQ07075 957 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 DUS1LQ6P1R4 473 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 JAMLQ86YT9 394 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 FAM20CQ8IXL6 584 aa11.34□□□□□ -0.59
HDGFL3-201ENST00000299633 CPSF4O95639 269 aaKnown RBP11.33□□□□□ -0.6
HDGFL3-201ENST00000299633 MTAPQ13126 283 aa11.33□□□□□ -0.6
HDGFL3-201ENST00000299633 GPATCH1Q9BRR8 931 aaKnown RBP11.33□□□□□ -0.6
HDGFL3-201ENST00000299633 COPS4Q9BT78 406 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms