RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 IL1BP01584 269 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 IGLV3-27P01718 113 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 EPB41P11171 864 aaKnown RBP8.09□□□□□ -1.11
CLK1-215ENST00000621181 PLA2G2AP14555 144 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 GLDCP23378 1020 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 ACTN2P35609 894 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 CCR5P51681 352 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 TBX4P57082 545 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 NXPH1P58417 271 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 DAOAP59103 153 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 YWHAEP62258 255 aaKnown RBP8.09□□□□□ -1.11
CLK1-215ENST00000621181 CXADRP78310 365 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 ECT2LQ008S8 904 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 BNIP3Q12983 259 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 TPD52L1Q16890 204 aaPredicted RBP8.09□□□□□ -1.11
CLK1-215ENST00000621181 MSANTD2Q6P1R3 559 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 MMS22LQ6ZRQ5 1243 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 SND1Q7KZF4 910 aaKnown RBP eCLIP8.09□□□□□ -1.11
CLK1-215ENST00000621181 ZNF843Q8N446 348 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 OXR1Q8N573 874 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 AADATQ8N5Z0 425 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 KDM1BQ8NB78 822 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 KCTD13Q8WZ19 329 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 RPL10LQ96L21 214 aaKnown RBP8.09□□□□□ -1.11
CLK1-215ENST00000621181 PRICKLE1Q96MT3 831 aaPredicted RBP8.09□□□□□ -1.11
CLK1-215ENST00000621181 LGMNQ99538 433 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 ZMYND15Q9H091 742 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 IFNKQ9P0W0 207 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 INTS6Q9UL03 887 aaKnown RBP8.09□□□□□ -1.11
CLK1-215ENST00000621181 ERVW-1Q9UQF0 538 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 CFAP46Q8IYW2 2715 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 COL6A6A6NMZ7 2263 aa8.09□□□□□ -1.12
CLK1-215ENST00000621181 A0A1W2PR77 199 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 TARSL2A2RTX5 802 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 BIN1O00499 593 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 SDC3O75056 442 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 LTFP02788 710 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 SRPRAP08240 638 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 VDRP11473 427 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 GOT1P17174 413 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 C5AR1P21730 350 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 MAT2AP31153 395 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 NNMTP40261 264 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CTSOP43234 321 aaPredicted RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 RXRGP48443 463 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 RGS7P49802 495 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 PPP2CBP62714 309 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 PPP2CAP67775 309 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 FANCCQ00597 558 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 TLE3Q04726 772 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CUL2Q13617 745 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 ELAVL3Q14576 367 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 EDRF1Q3B7T1 1238 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 TBC1D25Q3MII6 688 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CBWD6Q4V339 395 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 TAF1BQ53T94 588 aaPredicted RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 FSCBQ5H9T9 825 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 PITRM1Q5JRX3 1037 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CBWD3Q5JTY5 395 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CBWD5Q5RIA9 395 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 SFMBT2Q5VUG0 894 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 NADSYN1Q6IA69 706 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 KDM7AQ6ZMT4 941 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 KRBA2Q6ZNG9 492 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 SPACA3Q8IXA5 215 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CFAP52Q8N1V2 620 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 SCML4Q8N228 414 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 STK40Q8N2I9 435 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 GUF1Q8N442 669 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 MFSD2AQ8NA29 543 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 LMLNQ96KR4 655 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 MRGPRX3Q96LB0 322 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 NUCKS1Q9H1E3 243 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 ERVMER34-1Q9H9K5 563 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 L2HGDHQ9H9P8 463 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 SLCO3A1Q9UIG8 710 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 O00370 1275 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CETN3O15182 167 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 LATO43561 262 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 MAGEC1O60732 1142 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 LUC7L3O95232 432 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 MOCS2O96007 188 aaPredicted RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 ATP1A3P13637 1013 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 MZF1P28698 734 aaPredicted RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 NUMBP49757 651 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 INSM1Q01101 510 aaPredicted RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 CFHR1Q03591 330 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 KCNH2Q12809 1159 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 OVGP1Q12889 678 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 PNOCQ13519 176 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 STAT4Q14765 748 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 NAA30Q147X3 362 aaPredicted RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 NAPEPLDQ6IQ20 393 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 PMF1Q6P1K2 205 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 PRPF39Q86UA1 669 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 ERICH1Q86X53 443 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CCDC112Q8NEF3 446 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 SPATA20Q8TB22 786 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 CLEC4CQ8WTT0 213 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms