RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 PRSS16Q9NQE7 514 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 PCSK1NQ9UHG2 260 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 AP4E1Q9UPM8 1137 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 INVSQ9Y283 1065 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 FGF10O15520 208 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 CREB3O43889 395 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 LRCH4O75427 683 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 TMEM253P0C7T8 217 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 GNA12Q03113 381 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 SLC20A2Q08357 652 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 ZNF252P-AS1Q0IIN9 211 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 MAP7D1Q3KQU3 841 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 SPDYCQ5MJ68 293 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 RETSATQ6NUM9 610 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 LPCAT2Q7L5N7 544 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 FAM160A2Q8N612 972 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 ZNF366Q8N895 744 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 NIPA2Q8N8Q9 360 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 TC2NQ8N9U0 490 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 OR52K2Q8NGK3 314 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 ZNF564Q8TBZ8 553 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 RLN3Q8WXF3 142 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 MYO19Q96H55 970 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 SPON2Q9BUD6 331 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 TRIM7Q9C029 511 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 MKRN2Q9H000 416 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 DUSP15Q9H1R2 295 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 MAGEH1Q9H213 219 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 DHX35Q9H5Z1 703 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 ITM2CQ9NQX7 267 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 SLCO3A1Q9UIG8 710 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 USP18Q9UMW8 372 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 SCML1Q9UN30 329 aa17.72■□□□□ 0.43
SHKBP1-212ENST00000596163 CXorf51AA0A1B0GTR3 108 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 TTC34A8MYJ7 566 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 DCLK1O15075 740 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 DAPK3O43293 454 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 DNTTP04053 509 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 COPAP53621 1224 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 TPI1P60174 286 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 HADHQ16836 314 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 ACCSLQ4AC99 568 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 ARTNQ5T4W7 220 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 ZNF776Q68DI1 518 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 IL31Q6EBC2 164 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 NLRP14Q86W24 1093 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 PYROXD2Q8N2H3 581 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 ARHGEF26Q96DR7 871 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 PANX2Q96RD6 677 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 MAGEB5Q9BZ81 275 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 ATP13A1Q9HD20 1204 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 LUC7LQ9NQ29 371 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 ZNF212Q9UDV6 495 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 DNAI1Q9UI46 699 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 HPCAL4Q9UM19 191 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 PCDHGA5Q9Y5G8 931 aa17.71■□□□□ 0.43
SHKBP1-212ENST00000596163 MYO18AQ92614 2054 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 A0A0D9SEW6 157 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 WASH4PA8MWX3 477 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 EEF2KO00418 725 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 ATP9BO43861 1147 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 RAMP2O60895 175 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 LRP3O75074 770 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 SIN3BO75182 1162 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 NDUFS2O75306 463 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 STK19P49842 368 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 CLCN6P51797 869 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 GEMIN4P57678 1058 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 SEMA3BQ13214 749 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 DLG2Q15700 870 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 TTC31Q49AM3 519 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 PMS2CLQ68D20 193 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 DSG4Q86SJ6 1040 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 CCDC170Q8IYT3 715 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 RTL3Q8N8U3 475 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 ATP11CQ8NB49 1132 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 CCDC114Q96M63 670 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 PSMB7Q99436 277 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 SNRNP25Q9BV90 132 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 SLC6A17Q9H1V8 727 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 RSPH9Q9H1X1 276 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 SPTLC3Q9NUV7 552 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 VPS51Q9UID3 782 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 INTUQ9ULD6 942 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 CYP8B1Q9UNU6 501 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 HS3ST2Q9Y278 367 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 NCKAP1Q9Y2A7 1128 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 FARP1Q9Y4F1 1045 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 FANCMQ8IYD8 2048 aa17.7■□□□□ 0.42
SHKBP1-212ENST00000596163 ZFHX2Q9C0A1 2572 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 IGHV1OR15-9A0A0B4J2B8 117 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 GOLGA6L6A8MZA4 724 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 CBX4O00257 560 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 FOXD2O60548 495 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 EPN2O95208 641 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 C7P10643 843 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 CD6P30203 668 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 CDC25BP30305 580 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms