RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TMPRSS7Q7RTY8 843 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 LYSMD3Q7Z3D4 306 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 RABEPKQ7Z6M1 372 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 TAC4Q86UU9 113 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 MFN1Q8IWA4 741 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 FAM217AQ8IXS0 508 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 LGI2Q8N0V4 545 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 CPXM2Q8N436 756 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 GUF1Q8N442 669 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 CCDC150Q8NCX0 1101 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 SNX21Q969T3 373 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 PLD4Q96BZ4 506 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 FCRL2Q96LA5 508 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 FAM129BQ96TA1 746 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 C2orf49Q9BVC5 232 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 SCAND2PQ9GZW5 306 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 BTBD1Q9H0C5 482 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 PABPC3Q9H361 631 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 PNPLA8Q9NP80 782 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 SARDHQ9UL12 918 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 CFAP45Q9UL16 551 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 ZNF232Q9UNY5 417 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 ZNF510Q9Y2H8 683 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 CEP83Q9Y592 693 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 PTPRQQ9UMZ3 2332 aa7.09□□□□□ -1.28
PRPF40B-214ENST00000551320 ASH1LQ9NR48 2969 aaKnown RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 TP53BP1Q12888 1972 aaPredicted RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 SERTM1A2A2V5 107 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 CYSRT1A8MQ03 144 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 AGRPO00253 132 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 BIN1O00499 593 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 LCE2BO14633 110 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 CETN3O15182 167 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 IGLV3-19P01714 112 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 LTFP02788 710 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 PNMA6AP0CW24 399 aaPredicted RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 EPB41P11171 864 aaKnown RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 PDGFRAP16234 1089 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 PRLRP16471 622 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 RHOQP17081 205 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 RPL13P26373 211 aaKnown RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 CD27P26842 260 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 OXTRP30559 389 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC8A1P32418 973 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 GTF2H1P32780 548 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 NOS2P35228 1153 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 DPP6P42658 865 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 BCAT1P54687 386 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 C21orf59P57076 290 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 TARDBPQ13148 414 aaKnown RBP eCLIP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 TEAD4Q15561 434 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 CST6Q15828 149 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 ZNF542PQ5EBM4 170 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 PITRM1Q5JRX3 1037 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 ZNF776Q68DI1 518 aaPredicted RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 DBX2Q6ZNG2 339 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 KIAA0907Q7Z7F0 614 aaPredicted RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 GLRX5Q86SX6 157 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 TADA2BQ86TJ2 420 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 SPATS2Q86XZ4 545 aaKnown RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 PASD1Q8IV76 773 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 PPM1KQ8N3J5 372 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 OR14C36Q8NHC7 312 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 DQX1Q8TE96 717 aaKnown RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC35F5Q8WV83 523 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC35C1Q96A29 364 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 FAM149B1Q96BN6 582 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 KREMEN1Q96MU8 473 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 FZD3Q9NPG1 666 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 ST7Q9NRC1 585 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 HESX1Q9UBX0 185 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 FTSJ1Q9UET6 329 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 ERVW-1Q9UQF0 538 aa7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 ARID1BQ8NFD5 2236 aaPredicted RBP7.08□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3DA0A087WVF3 549 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3IA0A087WXS9 549 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3EA0A087X179 549 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3KA0A087X1G2 549 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 A0A1B0GTQ1 180 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 A0A1W2PR77 199 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 PMS2P1A4D2B8 440 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3FA6NER0 549 aaPredicted RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3LB9A6J9 549 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 K7ERQ8 282 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 ENC1O14682 589 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 MAPK13O15264 365 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 FFAR2O15552 330 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 FLRT2O43155 660 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TNFSF14O43557 240 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 C1QL1O75973 258 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 ENDOD1O94919 500 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 IL1BP01584 269 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 IGLV3-27P01718 113 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3HP0C7X1 549 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 VDRP11473 427 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 KRT5P13647 590 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TFE3P19532 575 aaPredicted RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 ABCB4P21439 1286 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 BMP6P22004 513 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms