RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 LRRC72A6NJI9 287 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3LB9A6J9 549 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 F5H5T6 163 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 SART1O43290 800 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 RNASEH1O60930 286 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 CNTN5O94779 1100 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 MT-CO1P00395 513 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 ERBB2P04626 1255 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3HP0C7X1 549 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 C5AR1P21730 350 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 PON1P27169 355 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 CLCN1P35523 988 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 PPP1R2P41236 205 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 RP1P56715 2156 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 C21orf59P57076 290 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 AUHQ13825 339 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 SMAD1Q15797 465 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 CAMK4Q16566 473 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 SOWAHCQ53LP3 525 aaPredicted RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3GQ6DHY5 549 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3CQ6IPX1 549 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 DPY19L2P1Q6NXN4 242 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 SND1Q7KZF4 910 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 KANSL1Q7Z3B3 1105 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3Q8IZP1 549 aaPredicted RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 EID2Q8N6I1 236 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 ATP6V0D2Q8N8Y2 350 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 ZNF557Q8N988 423 aaPredicted RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 C1orf131Q8NDD1 294 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 SHC3Q92529 594 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 SERAC1Q96JX3 654 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 PPP1R13BQ96KQ4 1090 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 ELF4Q99607 663 aaPredicted RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 FEM1AQ9BSK4 669 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 FAM204AQ9H8W3 233 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 VANGL2Q9ULK5 521 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 FZD4Q9ULV1 537 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 HS3ST4Q9Y661 456 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 LRRK1Q38SD2 2015 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 K7ERQ8 282 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 TLR4O00206 839 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 FOXN3O00409 490 aaPredicted RBP11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 ENC1O14682 589 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 MED7O43513 233 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 LATO43561 262 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 MOCS3O95396 460 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 ADCY5O95622 1261 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 GNA14O95837 355 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 CCR5P51681 352 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 PLK1P53350 603 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 NXPH1P58417 271 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 TAS2R38P59533 333 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 CDK17Q00537 523 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 CNTN1Q12860 1018 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 NME3Q13232 169 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 MEA1Q16626 185 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 ACCSLQ4AC99 568 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 PTPN20Q4JDL3 420 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 AGBL4Q5VU57 503 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 RNF219Q5W0B1 726 aaPredicted RBP11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 OLFML1Q6UWY5 402 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 Q6ZVU0 165 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 PDZD3Q86UT5 571 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 CCDC117Q8IWD4 279 aaPredicted RBP11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 KLK6Q92876 244 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 FAM131CQ96AQ9 280 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 PSMB7Q99436 277 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 SIK2Q9H0K1 926 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 FTSJ1Q9UET6 329 aa11.89□□□□□ -0.51
PRPF40B-212ENST00000551111 A0A1B0GVM2 712 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 TCAF2A6NFQ2 919 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 SMAD6O43541 496 aaKnown RBP11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 ATP9BO43861 1147 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 BNIP3LO60238 219 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 SNAP91O60641 907 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 PAGE1O75459 146 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 LDOC1O95751 146 aaPredicted RBP11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 ADH1BP00325 375 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 ITGAVP06756 1048 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 CTSLP07711 333 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 CCR1P32246 355 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 ELAVL3Q14576 367 aaKnown RBP11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 DLG2Q15700 870 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 ALFQ53S48 1182 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 C2CD6Q53TS8 623 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC47A2Q86VL8 602 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 ZNF683Q8IZ20 524 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 RNF34Q969K3 372 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 LRIG1Q96JA1 1093 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 CNDP2Q96KP4 475 aaKnown RBP11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 MYOCQ99972 504 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 PIGVQ9NUD9 493 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 APEX2Q9UBZ4 518 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 PPM1HQ9ULR3 514 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 PCDHGC3Q9UN70 934 aa11.88□□□□□ -0.51
PRPF40B-212ENST00000551111 MGAQ8IWI9 3026 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms