RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CENPCQ03188 943 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 KRT31Q15323 416 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 DLG2Q15700 870 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 INAVAQ3KP66 663 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 ARL13BQ3SXY8 428 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 C6orf118Q5T5N4 469 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 CDKAL1Q5VV42 579 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 NAA35Q5VZE5 725 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 UNQ6494/PRO21346Q6UXR6 183 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 TRIM72Q6ZMU5 477 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 NOP9Q86U38 636 aaKnown RBP9.62□□□□□ -0.87
YBX3-218ENST00000546298 OR14C36Q8NHC7 312 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 FRS2Q8WU20 508 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 ALG14Q96F25 216 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
YBX3-218ENST00000546298 HAPLN3Q96S86 360 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 TBCBQ99426 244 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 VPS16Q9H269 839 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 FANCLQ9NW38 375 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 PCOLCE2Q9UKZ9 415 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 WASF3Q9UPY6 502 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 FNDC3AQ9Y2H6 1198 aaKnown RBP9.62□□□□□ -0.87
YBX3-218ENST00000546298 MSRB2Q9Y3D2 182 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 SNX11Q9Y5W9 270 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 MYO15AQ9UKN7 3530 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3DA0A087WVF3 549 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3IA0A087WXS9 549 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3EA0A087X179 549 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3KA0A087X1G2 549 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3FA6NER0 549 aaPredicted RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 DRGXA6NNA5 263 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3LB9A6J9 549 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 MCF2LO15068 1137 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 HYAL3O43820 417 aaPredicted RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 PCDHGA12O60330 932 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 GFPT2O94808 682 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 MBD3O95983 291 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 CYP1A1P04798 512 aaPredicted RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 IGHV4-34P06331 123 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 MMEP08473 750 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3HP0C7X1 549 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 SPINK2P20155 84 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 CDK11BP21127 795 aaKnown RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 CLCN6P51797 869 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 NOMO3P69849 1222 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 FAM193AP78312 1265 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 SYCP1Q15431 976 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 STX1AQ16623 288 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 OTUD1Q5VV17 481 aaPredicted RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3GQ6DHY5 549 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3CQ6IPX1 549 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 RETSATQ6NUM9 610 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 ZNF783Q6ZMS7 281 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 DBX2Q6ZNG2 339 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 RBM43Q6ZSC3 357 aaKnown RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 C14orf80Q86SX3 495 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 GLRX5Q86SX6 157 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 PRPF39Q86UA1 669 aaKnown RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D3Q8IZP1 549 aaPredicted RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 DCAF4L2Q8NA75 395 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 RHBDD1Q8TEB9 315 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 CPA5Q8WXQ8 436 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 ADAMTS14Q8WXS8 1223 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 CAMK1GQ96NX5 476 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 GANQ9H2C0 597 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 RETREG1Q9H6L5 497 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 IL21RQ9HBE5 538 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 AASDHPPTQ9NRN7 309 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 FAM207AQ9NSI2 230 aaPredicted RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 SERGEFQ9UGK8 458 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 TMEM59LQ9UK28 342 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 NOCTQ9UK39 431 aaKnown RBP9.61□□□□□ -0.87
YBX3-218ENST00000546298 PPM1HQ9ULR3 514 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 HS3ST2Q9Y278 367 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 OR51B4Q9Y5P0 310 aa9.61□□□□□ -0.87
YBX3-218ENST00000546298 IGLV3-10A0A075B6K4 115 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 ILVBLA1L0T0 632 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 FAM221BA6H8Z2 402 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 C1QTNF9BB2RNN3 333 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 H0Y8X5 98 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 YKT6O15498 198 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 BNIP3LO60238 219 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 MAGEC1O60732 1142 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 SRGAP2O75044 1071 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 CBFA2T3O75081 653 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 CNTN5O94779 1100 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 TOP3BO95985 862 aaKnown RBP9.6□□□□□ -0.87
YBX3-218ENST00000546298 PRNPP04156 253 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 CCDC172P0C7W6 258 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 FTH1P19P0C7X4 201 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 C1QTNF9P0C862 333 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 TFE3P19532 575 aaPredicted RBP9.6□□□□□ -0.87
YBX3-218ENST00000546298 MMP8P22894 467 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 CD38P28907 300 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 OR1E1P30953 314 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 SDC4P31431 198 aa9.6□□□□□ -0.87
YBX3-218ENST00000546298 FLT3P36888 993 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms