RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 EID2Q8N6I1 236 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 ZNF557Q8N988 423 aaPredicted RBP12.24□□□□□ -0.45
GABPB1-206ENST00000543881 C1orf131Q8NDD1 294 aaKnown RBP12.24□□□□□ -0.45
GABPB1-206ENST00000543881 SAP25Q8TEE9 199 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 FGF11Q92914 225 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 SKA1Q96BD8 255 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 PPP1R13BQ96KQ4 1090 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 BTN2A3PQ96KV6 586 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 PLCB1Q9NQ66 1216 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 SERGEFQ9UGK8 458 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 SLCO3A1Q9UIG8 710 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 DNAJC12Q9UKB3 198 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 ERVW-1Q9UQF0 538 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 NCKAP1Q9Y2A7 1128 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 SYNJ2BP-COX16A0A087WUM0 186 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 TYW5A2RUC4 315 aaKnown RBP12.23□□□□□ -0.45
GABPB1-206ENST00000543881 ASLP04424 464 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 WNT1P04628 370 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 GLI1P08151 1106 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 CFHR1Q03591 330 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 KCNMA1Q12791 1236 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 ARID5BQ14865 1188 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 MAN2A1Q16706 1144 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 PTPN20Q4JDL3 420 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 C9orf64Q5T6V5 341 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 OLFML1Q6UWY5 402 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 DHX40Q8IX18 779 aaKnown RBP12.23□□□□□ -0.45
GABPB1-206ENST00000543881 GANCQ8TET4 914 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 TSC1Q92574 1164 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 RPL10LQ96L21 214 aaKnown RBP12.23□□□□□ -0.45
GABPB1-206ENST00000543881 NDST4Q9H3R1 872 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 FAM204AQ9H8W3 233 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.23□□□□□ -0.457e-7■■□□□ 14.1
GABPB1-206ENST00000543881 ASNSD1Q9NWL6 643 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 DDIT4Q9NX09 232 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 COX16Q9P0S2 106 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 ZNF462Q96JM2 2506 aa12.23□□□□□ -0.45
GABPB1-206ENST00000543881 J3QKU1 62 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 BRINP1O60477 761 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 SRPRAP08240 638 aaKnown RBP12.22□□□□□ -0.45
GABPB1-206ENST00000543881 MZF1P28698 734 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-206ENST00000543881 STK19P49842 368 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-206ENST00000543881 IRAK1P51617 712 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 GALCP54803 685 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 ST8SIA6P61647 398 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 CXADRP78310 365 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 CDK17Q00537 523 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 ECT2LQ008S8 904 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 TLE3Q04726 772 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 PTK2Q05397 1052 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 CCDC173Q0VFZ6 552 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-206ENST00000543881 VWA3BQ502W6 1294 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 EFHC1Q5JVL4 640 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 OTUD1Q5VV17 481 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-206ENST00000543881 OR6B2Q6IFH4 312 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 PCSK4Q6UW60 755 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 C11orf57Q6ZUT1 292 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-206ENST00000543881 USP30Q70CQ3 517 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 FAM71AQ8IYT1 594 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 CCAR2Q8N163 923 aaKnown RBP12.22□□□□□ -0.45
GABPB1-206ENST00000543881 ATP6V0D2Q8N8Y2 350 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 KDM1BQ8NB78 822 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 OR52K2Q8NGK3 314 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 FAM129BQ96TA1 746 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 PABPC3Q9H361 631 aaKnown RBP12.22□□□□□ -0.45
GABPB1-206ENST00000543881 EBF2Q9HAK2 575 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 AASDHPPTQ9NRN7 309 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 FBXL12Q9NXK8 326 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 SCML1Q9UN30 329 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 TENM4Q6N022 2769 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 ITIH6Q6UXX5 1313 aa12.22□□□□□ -0.45
GABPB1-206ENST00000543881 CFAP46Q8IYW2 2715 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 FAM170AA1A519 330 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 CAPN8A6NHC0 703 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 CYSRT1A8MQ03 144 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 F5H5T6 163 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 MID1O15344 667 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 YKT6O15498 198 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 HSF2BPO75031 334 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 VAV1P15498 845 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 PDGFRAP16234 1089 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 TFE3P19532 575 aaPredicted RBP12.21□□□□□ -0.45
GABPB1-206ENST00000543881 CD38P28907 300 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 EPHA8P29322 1005 aaPredicted RBP12.21□□□□□ -0.45
GABPB1-206ENST00000543881 CCR1P32246 355 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 GGCXP38435 758 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 CENPCQ03188 943 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 CST6Q15828 149 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 CXorf57Q6NSI4 855 aaKnown RBP12.21□□□□□ -0.45
GABPB1-206ENST00000543881 FBXL22Q6P050 247 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 NCEH1Q6PIU2 408 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 MMAAQ8IVH4 418 aaKnown RBP12.21□□□□□ -0.45
GABPB1-206ENST00000543881 CCDC117Q8IWD4 279 aaPredicted RBP12.21□□□□□ -0.45
GABPB1-206ENST00000543881 SPACA3Q8IXA5 215 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 PTPRN2Q92932 1015 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 ALG14Q96F25 216 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 ANLNQ9NQW6 1124 aa12.21□□□□□ -0.45
GABPB1-206ENST00000543881 GDF3Q9NR23 364 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms