RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NR0B2Q15466 257 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 KMT5BQ4FZB7 885 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 FAM133BQ5BKY9 247 aaKnown RBP14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 FSCBQ5H9T9 825 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 RAB41Q5JT25 222 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 RRAGBQ5VZM2 374 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 BORAQ6PGQ7 559 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 GCNT7Q6ZNI0 430 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 BHLHA9Q7RTU4 235 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 ABI3BPQ7Z7G0 1075 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 SPATA20Q8TB22 786 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 KLK6Q92876 244 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 SPAG5Q96R06 1193 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 NT5C1AQ9BXI3 368 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 EPB41L5Q9HCM4 733 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 PREBQ9HCU5 417 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 GPR27Q9NS67 375 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 CCDC39Q9UFE4 941 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 CRYBG3Q68DQ2 2970 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 RP1L1Q8IWN7 2480 aaPredicted RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 IRAK2O43187 625 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 MSI1O43347 362 aaKnown RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 BMP15O95972 392 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 CSF2P04141 144 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 NME1P15531 152 aaKnown RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 AKT2P31751 481 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 STK19P49842 368 aaPredicted RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 AP3M2P53677 418 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 CLDN2P57739 230 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 CLDN10P78369 228 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 FZD2Q14332 565 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 SGSM1Q2NKQ1 1148 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 DEFB133Q30KQ1 61 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 PPP1R26Q5T8A7 1209 aaPredicted RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 PM20D1Q6GTS8 502 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 SPOPLQ6IQ16 392 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 ZFAND4Q86XD8 727 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 DTX1Q86Y01 620 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 HJURPQ8NCD3 748 aaPredicted RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 NDRG1Q92597 394 aaKnown RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 NAT6Q93015 286 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 MYEOVQ96EZ4 313 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 RPL10LQ96L21 214 aaKnown RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 PRICKLE1Q96MT3 831 aaPredicted RBP14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 CCDC3Q9BQI4 270 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 SLC12A9Q9BXP2 914 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 SYNDIG1Q9H7V2 258 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 TMPRSS4Q9NRS4 437 aa14.32□□□□□ -0.12
NKX3-1-202ENST00000523261 A0A1W2PQU0 124 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 LRRIQ3A6PVS8 624 aaPredicted RBP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 EIF3DO15371 548 aaKnown RBP eCLIP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 AQP9O43315 295 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 ASS1P00966 412 aaKnown RBP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 HNRNPA2B1P22626 353 aaKnown RBP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 RPS24P62847 133 aaKnown RBP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 ZNF284Q2VY69 593 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 RNF219Q5W0B1 726 aaPredicted RBP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 OR6B2Q6IFH4 312 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 Q6ZSR6 202 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 EPM2AIP1Q7L775 607 aaPredicted RBP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 PIGZQ86VD9 579 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 CCDC65Q8IXS2 484 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 SLC35F3Q8IY50 421 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 CARNMT1Q8N4J0 409 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 ZNF507Q8TCN5 953 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 PARD3BQ8TEW8 1205 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 TAF4BQ92750 862 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 ZSCAN31Q96LW9 406 aaPredicted RBP14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 BOCQ9BWV1 1114 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 PISDQ9UG56 409 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 KLF15Q9UIH9 416 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 CEP83Q9Y592 693 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 CSMD1Q96PZ7 3565 aa14.31□□□□□ -0.12
NKX3-1-202ENST00000523261 PRAMEF33A0A0G2JMD5 474 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 H3BM21 787 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 TPP1O14773 563 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 ACSL4O60488 711 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 PRAMEF10O60809 474 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 ZBED1O96006 694 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 IGLV3-27P01718 113 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 TKTL1P51854 596 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 CDH18Q13634 790 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 FAM46CQ5VWP2 391 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 NADSYN1Q6IA69 706 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 ATCAYQ86WG3 371 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 HORMAD1Q86X24 394 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 DCP2Q8IU60 420 aaKnown RBP14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 APCDD1Q8J025 514 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 RNF139Q8WU17 664 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 FRS2Q8WU20 508 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 EDEM1Q92611 657 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 IL12RB2Q99665 862 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 ULBP1Q9BZM6 244 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 FOXP3Q9BZS1 431 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 UBXN6Q9BZV1 441 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 STRADBQ9C0K7 418 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 PPM1HQ9ULR3 514 aa14.3□□□□□ -0.12
NKX3-1-202ENST00000523261 SPTY2D1-AS1A0A0U1RR47 76 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 A6NNZ2 444 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 318.7 ms