RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 VWA8A3KMH1 1905 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 C2CD4BA6NLJ0 364 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 GOLGA8MH3BSY2 632 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 BOLA2-SMG1P6H3BVE0 249 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MLLT1Q03111 559 aaPredicted RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 PKDCCQ504Y2 493 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 SLC44A4Q53GD3 710 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 VSTM1Q6UX27 236 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 TRIM67Q6ZTA4 783 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MTDHQ86UE4 582 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 PHOSPHO2Q8TCD6 241 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 DQX1Q8TE96 717 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MCRS1Q96EZ8 462 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 VCPIP1Q96JH7 1222 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 SNRNP25Q9BV90 132 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CEP41Q9BYV8 373 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 ZBP1Q9H171 429 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CNGB3Q9NQW8 809 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 TLR8Q9NR97 1041 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CHST7Q9NS84 486 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 PIGVQ9NUD9 493 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MARCH2Q9P0N8 246 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 HCFC2Q9Y5Z7 792 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 F5P12259 2224 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 REV3LO60673 3130 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CCDC195A0A1B0GUA6 201 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 BNIP3LO60238 219 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 ATP6V1C1P21283 382 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MATKP42679 507 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 ZNF143P52747 638 aaPredicted RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 LACTB2Q53H82 288 aaPredicted RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 GRAMD4Q6IC98 578 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 NPNTQ6UXI9 565 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CIR1Q86X95 450 aaPredicted RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CFAP52Q8N1V2 620 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MRPL43Q8N983 215 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 LRRC57Q8N9N7 239 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MAML1Q92585 1016 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 P3H4Q92791 437 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CELF6Q96J87 481 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 SPATA17Q96L03 361 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 FBXO44Q9H4M3 255 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 OSER1Q9NX31 292 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 VANGL2Q9ULK5 521 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 SLC12A4Q9UP95 1085 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 AP4E1Q9UPM8 1137 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 AK5Q9Y6K8 562 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 RALGAPA2Q2PPJ7 1873 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 H7C0C1 242 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CST8O60676 142 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 HDCP19113 662 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 ADCY8P40145 1251 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 ATP5OP48047 213 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 KCNQ1P51787 676 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MYBPC3Q14896 1274 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 C6orf183Q5T699 404 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 SMG7Q92540 1137 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 MRPS31Q92665 395 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 PEBP4Q96S96 227 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 HERC2P3Q9BVR0 1158 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 STMN4Q9H169 189 aaPredicted RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 RC3H2Q9HBD1 1191 aaKnown RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 CLDND1Q9NY35 253 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 UBAP1Q9NZ09 502 aa8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 COLQQ9Y215 455 aaPredicted RBP8.89□□□□□ -0.99
LIMCH1-209ENST00000509277 VCANP13611 3396 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 INPPL1O15357 1258 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 TPBGLP0DKB5 382 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 GM2AP17900 193 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 AMPD1P23109 780 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 NOS2P35228 1153 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 ARL4AP40617 200 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 DMPKQ09013 629 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 EFHC2Q5JST6 749 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 C6orf118Q5T5N4 469 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 AGBL2Q5U5Z8 902 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 SLC8B1Q6J4K2 584 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 IYDQ6PHW0 289 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 RGS9BPQ6ZS82 235 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 TPGS1Q6ZTW0 290 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 PDZD4Q76G19 769 aaPredicted RBP8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 Q7L0L9 218 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 GET4Q7L5D6 327 aaPredicted RBP8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 SLC26A9Q7LBE3 791 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 C14orf80Q86SX3 495 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 CHSY1Q86X52 802 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 DENND1CQ8IV53 801 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 TEX9Q8N6V9 391 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 MAGEC3Q8TD91 643 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 DEPDC1BQ8WUY9 529 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 TCEAL4Q96EI5 215 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 RILPQ96NA2 401 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 PLEKHG4BQ96PX9 1271 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 GDF15Q99988 308 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 BRD8Q9H0E9 1235 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 ASAH2Q9NR71 780 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 MPP6Q9NZW5 540 aa8.88□□□□□ -0.99
LIMCH1-209ENST00000509277 ZNF148Q9UQR1 794 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms