RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PRDX6P30041 224 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 OSTNP61366 133 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 RPS6P62753 249 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 GBE1Q04446 702 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 CDK18Q07002 472 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 ITGADQ13349 1161 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 NEDD8Q15843 81 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 TAZQ16635 292 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 PPWD1Q96BP3 646 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 DHRS1Q96LJ7 313 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 HAUS8Q9BT25 410 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 POLR3FQ9H1D9 316 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 RPF2Q9H7B2 306 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 GPBP1L1Q9HC44 474 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 ZFYVE28Q9HCC9 887 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 IGSF9Q9P2J2 1179 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 TMEM98Q9Y2Y6 226 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 KCNU1A8MYU2 1149 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 GOLGA8TH3BQL2 631 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 TK2O00142 265 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 HTRA2O43464 458 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 B4GAT1O43505 415 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 FAM189A1O60320 539 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 ONECUT3O60422 494 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 TSHRP16473 764 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 GLDCP23378 1020 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 GLRBP48167 497 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 CREB5Q02930 508 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 STILQ15468 1287 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 MTERF2Q49AM1 385 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 NBPF12Q5TAG4 269 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 IL31Q6EBC2 164 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 DCLRE1AQ6PJP8 1040 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 THNSL1Q8IYQ7 743 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 NIPA2Q8N8Q9 360 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 CMASQ8NFW8 434 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 CXorf21Q9HAI6 301 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 ZNF70Q9UC06 446 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 SEPT9Q9UHD8 586 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 DOCK5Q9H7D0 1870 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 LRRIQ4A6NIV6 560 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 GLRA3O75311 464 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 MT-CO1P00395 513 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 CCDC130P13994 396 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 TFE3P19532 575 aaPredicted RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 IL4RP24394 825 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 CA8P35219 290 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 HARS2P49590 506 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 ATXN1P54253 815 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 NUP107P57740 925 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 TXNL4AP83876 142 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 TRAF2Q12933 501 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 CROCCP3Q8IVE0 287 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 GABPB2Q8TAK5 448 aaPredicted RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 UBA3Q8TBC4 463 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 FBXL20Q96IG2 436 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 ZNF597Q96LX8 424 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 TWNKQ96RR1 684 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 MSTO1Q9BUK6 570 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 TRIM8Q9BZR9 551 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 TRPC7Q9HCX4 862 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 PCDH12Q9NPG4 1184 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 FAM32AQ9Y421 112 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 AP4S1Q9Y587 144 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 CEP350Q5VT06 3117 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 RGSL1A5PLK6 1076 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 ZNF839A8K0R7 811 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 E7ENX8 843 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 USP12O75317 370 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 BCAS2O75934 225 aaPredicted RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 CDH3P22223 829 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 MGAT1P26572 445 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 TNK2Q07912 1038 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 ART3Q13508 389 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 PTK2BQ14289 1009 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 NR1D2Q14995 579 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 CARTPTQ16568 116 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 FSCBQ5H9T9 825 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 PERM1Q5SV97 790 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 MOB2Q70IA6 237 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 XYLT1Q86Y38 959 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 HERC6Q8IVU3 1022 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 C4orf19Q8IY42 314 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 SPATA6LQ8N4H0 392 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 DDHD1Q8NEL9 900 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 VPS50Q96JG6 964 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 SERPINI1Q99574 410 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 GATA5Q9BWX5 397 aaPredicted RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 OSBPL11Q9BXB4 747 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 SMOXQ9NWM0 555 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 MOCS1Q9NZB8 636 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 PAK5Q9P286 719 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 ITM2BQ9Y287 266 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 MATN2O00339 956 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 TRDMT1O14717 391 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 NCAM1P13591 858 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 ACAT1P24752 427 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 FAM102AQ5T9C2 384 aaPredicted RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 SWSAP1Q6NVH7 229 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms