RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 MSI1O43347 362 aaKnown RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 KRT75O95678 551 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 THP07101 528 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 PRKACBP22694 351 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 ENTPD1P49961 510 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 TTC39CQ8N584 583 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 HIPK4Q8NE63 616 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 PIP4K2CQ8TBX8 421 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 VPS50Q96JG6 964 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 CCDC134Q9H6E4 229 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 ZNF395Q9H8N7 513 aaPredicted RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 LIN28AQ9H9Z2 209 aaKnown RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP11-206ENST00000469080 SLC17A7Q9P2U7 560 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 ARHGAP10A1A4S6 786 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 RRN3P2A6NIE6 340 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 AOC2O75106 756 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 ETFBP38117 255 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 CPT1AP50416 773 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 TUBA1BP68363 451 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 TMPRSS15P98073 1019 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 MMEL1Q495T6 779 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 CST9Q5W186 159 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 TUBA1AQ71U36 451 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 PCGF5Q86SE9 256 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 ABI1Q8IZP0 508 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 PRPF18Q99633 342 aaKnown RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 SFMBT1Q9UHJ3 866 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 DSEQ9UL01 958 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 FAM47DPA6NHR8 397 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 NDC80O14777 642 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 ENDOD1O94919 500 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 ESRRAP11474 423 aaPredicted RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 ARL1P40616 181 aaPredicted RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 LILRA4P59901 499 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 MOGSQ13724 837 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 E2F2Q14209 437 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 SLC1A5Q15758 541 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 MYLK3Q32MK0 819 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 ARL13BQ3SXY8 428 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 LDLRAD1Q5T700 205 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 RAPH1Q70E73 1250 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 SCAMP5Q8TAC9 235 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 TCP10LQ8TDR4 215 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 TNIP3Q96KP6 325 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 FAM161BQ96MY7 647 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 CADM1Q9BY67 442 aaKnown RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 PTPRHQ9HD43 1115 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 SH3PXD2BA1X283 911 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 C9IYK1 514 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 COPEO14579 308 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 BUD23O43709 281 aaKnown RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 FAM189A1O60320 539 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 ZBTB11O95625 1053 aaPredicted RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 ENO2P09104 434 aaPredicted RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 CXCR3P49682 368 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 ZNF143P52747 638 aaPredicted RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 GJA9P57773 515 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 TPI1P60174 286 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 PRPF39Q86UA1 669 aaKnown RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 OSTM1Q86WC4 334 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 LRRC6Q86X45 466 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 FAM20CQ8IXL6 584 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 MPP5Q8N3R9 675 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 GOLM1Q8NBJ4 401 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 PCDH19Q8TAB3 1148 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 SGF29Q96ES7 293 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 ZNF560Q96MR9 790 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 GPATCH1Q9BRR8 931 aaKnown RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 EHD1Q9H4M9 534 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 XPNPEP3Q9NQH7 507 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 SATB2Q9UPW6 733 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 RANBP2P49792 3224 aaKnown RBP12.59□□□□□ -0.39
USP11-206ENST00000469080 UNC80Q8N2C7 3258 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 NRCAMQ92823 1304 aa12.59□□□□□ -0.39
USP11-206ENST00000469080 IGKV6-21A0A0C4DH24 114 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 WDR27A2RRH5 827 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 EEF2KO00418 725 aaKnown RBP12.58□□□□□ -0.39
USP11-206ENST00000469080 PMPCBO75439 489 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 DCTN3O75935 186 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 CDH3P22223 829 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 CD300CQ08708 224 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 CDC16Q13042 620 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 STAT4Q14765 748 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 ARHGEF6Q15052 776 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 NADK2Q4G0N4 442 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 TRMT10BQ6PF06 316 aaKnown RBP12.58□□□□□ -0.39
USP11-206ENST00000469080 SUN5Q8TC36 379 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 EXT2Q93063 718 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 MOCOSQ96EN8 888 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 RNF157Q96PX1 679 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 MRPL1Q9BYD6 325 aaKnown RBP12.58□□□□□ -0.39
USP11-206ENST00000469080 TBC1D23Q9NUY8 699 aa12.58□□□□□ -0.39
USP11-206ENST00000469080 MIOSQ9NXC5 875 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms