RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 SLC8A1P32418 973 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 RDXP35241 583 aaKnown RBP19.93■□□□□ 0.78
USP40-207ENST00000450940 GSCP56915 257 aaPredicted RBP19.93■□□□□ 0.78
USP40-207ENST00000450940 BNC1Q01954 994 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 LRRC31Q6UY01 552 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 SETD3Q86TU7 594 aaPredicted RBP19.93■□□□□ 0.78
USP40-207ENST00000450940 STK40Q8N2I9 435 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 AOPEPQ8N6M6 819 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 DEFB124Q8NES8 71 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 OR2I1PQ8NGU4 316 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 SLC30A5Q8TAD4 765 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 FAM131CQ96AQ9 280 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 ORAI3Q9BRQ5 295 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 NAT10Q9H0A0 1025 aaKnown RBP19.93■□□□□ 0.78
USP40-207ENST00000450940 SLC32A1Q9H598 525 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 TMPRSS4Q9NRS4 437 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 ZNF212Q9UDV6 495 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 SERGEFQ9UGK8 458 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 SNX10Q9Y5X0 201 aa19.93■□□□□ 0.78
USP40-207ENST00000450940 FAM170AA1A519 330 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 ADH1BP00325 375 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 IGHV4-34P06331 123 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 ATP1A3P13637 1013 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 VAV1P15498 845 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 C5AR1P21730 350 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 CD27P26842 260 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 GALCP54803 685 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 CLEC16AQ2KHT3 1053 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 PHF13Q86YI8 300 aaPredicted RBP19.92■□□□□ 0.78
USP40-207ENST00000450940 EMC1Q8N766 993 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 PCMTD1Q96MG8 357 aaPredicted RBP19.92■□□□□ 0.78
USP40-207ENST00000450940 PSMB7Q99436 277 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 NEUROG2Q9H2A3 272 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 METTL5Q9NRN9 209 aaKnown RBP19.92■□□□□ 0.78
USP40-207ENST00000450940 SLC25A13Q9UJS0 675 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 VPS28Q9UK41 221 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 ANGPTL2Q9UKU9 493 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 WASF3Q9UPY6 502 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 HS3ST2Q9Y278 367 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 SLCO1B1Q9Y6L6 691 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 CHD5Q8TDI0 1954 aa19.92■□□□□ 0.78
USP40-207ENST00000450940 PLXNA2O75051 1894 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 A0A1W2PP55 124 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 C2CD4BA6NLJ0 364 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 E9PAM4 449 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 ZNF883P0CG24 379 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 GOT1P17174 413 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 PTPN9P43378 593 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 AFF3P51826 1226 aaKnown RBP19.91■□□□□ 0.78
USP40-207ENST00000450940 ZNF252P-AS1Q0IIN9 211 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 CCDC14Q49A88 953 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 ANO6Q4KMQ2 910 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 KIAA0895LQ68EN5 471 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 SH2D3CQ8N5H7 860 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 AADATQ8N5Z0 425 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 RXFP2Q8WXD0 754 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 CENPIQ92674 756 aaPredicted RBP19.91■□□□□ 0.78
USP40-207ENST00000450940 CNTNAP3BQ96NU0 1288 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 C11orf70Q9BRQ4 267 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 CNTNAP3Q9BZ76 1288 aa19.91■□□□□ 0.78
USP40-207ENST00000450940 PPARGC1AQ9UBK2 798 aaKnown RBP19.91■□□□□ 0.78
USP40-207ENST00000450940 MCF2LO15068 1137 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 ALOX15BO15296 676 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 RNASEH2AO75792 299 aaKnown RBP19.9■□□□□ 0.78
USP40-207ENST00000450940 RHOCP08134 193 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 NSFP46459 744 aaKnown RBP19.9■□□□□ 0.78
USP40-207ENST00000450940 NUMBP49757 651 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 KRT83P78385 493 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 NRG1Q02297 640 aaPredicted RBP19.9■□□□□ 0.78
USP40-207ENST00000450940 HNRNPDQ14103 355 aaKnown RBP19.9■□□□□ 0.78
USP40-207ENST00000450940 DLG2Q15700 870 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 IL27RAQ6UWB1 636 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 ZNF783Q6ZMS7 281 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 STRADAQ7RTN6 431 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 FAM131BQ86XD5 332 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 OR2T34Q8NGX1 318 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 JOSD2Q8TAC2 188 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 GANCQ8TET4 914 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 OMDQ99983 421 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 C2orf49Q9BVC5 232 aaPredicted RBP19.9■□□□□ 0.78
USP40-207ENST00000450940 TM9SF3Q9HD45 589 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 RTN4Q9NQC3 1192 aaKnown RBP19.9■□□□□ 0.78
USP40-207ENST00000450940 MPP6Q9NZW5 540 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 ADAM22Q9P0K1 906 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 MYO6Q9UM54 1294 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 TMEM131Q92545 1883 aa19.9■□□□□ 0.78
USP40-207ENST00000450940 CEP295Q9C0D2 2601 aa19.89■□□□□ 0.78
USP40-207ENST00000450940 ILVBLA1L0T0 632 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 LRRC72A6NJI9 287 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 FSBPO95073 299 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 SDC4P31431 198 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 ADRA1BP35368 520 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 DRD3P35462 400 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 GRIA4P48058 902 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 PSMD8P48556 350 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 CSNK1EP49674 416 aaKnown RBP19.89■□□□□ 0.77
USP40-207ENST00000450940 CCR5P51681 352 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 ATP11AP98196 1134 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 RAB6CQ53S08 254 aa19.89■□□□□ 0.77
USP40-207ENST00000450940 C6orf118Q5T5N4 469 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms