RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 IL27RAQ6UWB1 636 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CWC27Q6UX04 472 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 KDM7AQ6ZMT4 941 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 MACC1Q6ZN28 852 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PDZD4Q76G19 769 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PLEKHH3Q7Z736 793 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ASPGQ86U10 573 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CIR1Q86X95 450 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF677Q86XU0 584 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CCDC103Q8IW40 242 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 DENND6AQ8IWF6 608 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 REXO1L1PQ8IX06 675 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARHGAP18Q8N392 663 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CCNYL1Q8N7R7 359 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANKRD52Q8NB46 1076 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PIK3C3Q8NEB9 887 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 TTLQ8NG68 377 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 OR7G1Q8NGA0 311 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 OR10Z1Q8NGY1 313 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 HUS1BQ8NHY5 278 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 GANCQ8TET4 914 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SCFD2Q8WU76 684 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SEPT1Q8WYJ6 367 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZCCHC14Q8WYQ9 949 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PTP4A1Q93096 173 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZSWIM3Q96MP5 696 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PRICKLE1Q96MT3 831 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANKRD27Q96NW4 1050 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CDK5RAP1Q96SZ6 601 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ATP6V0BQ99437 205 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PIP5K1AQ99755 562 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 C19orf43Q9BQ61 176 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 MLPHQ9BV36 600 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 NDEL1Q9GZM8 345 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 TUFT1Q9NNX1 390 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 DMAP1Q9NPF5 467 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANLNQ9NQW6 1124 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 OLA1Q9NTK5 396 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 NUDT15Q9NV35 164 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARMC1Q9NVT9 282 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 UCKL1Q9NWZ5 548 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 LARSQ9P2J5 1176 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 MYO1AQ9UBC5 1043 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 TRPS1Q9UHF7 1281 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 TMEFF2Q9UIK5 374 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 TLK1Q9UKI8 766 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZBTB21Q9ULJ3 1066 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PTPN22Q9Y2R2 807 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 DTNAQ9Y4J8 743 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 HS3ST3A1Q9Y663 406 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CACNG2Q9Y698 323 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 COMMD3-BMI1R4GMX3 469 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CFAP74Q9C0B2 1584 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 REREQ9P2R6 1566 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CPDO75976 1380 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 INSRP06213 1382 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PLEKHH2Q8IVE3 1493 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 MBD5Q9P267 1494 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 GPATCH8Q9UKJ3 1502 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CEP170BQ9Y4F5 1589 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 SETBP1Q9Y6X0 1596 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 FRMD3A2A2Y4 597 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF879B4DU55 563 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 GPR89AB7ZAQ6 455 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 BTBD19C9JJ37 291 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 H0YIN7 160 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CASC3O15234 703 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 NDUFA2O43678 99 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 BUB1O43683 1085 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 DOK2O60496 412 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 PFDN1O60925 122 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 RBBP9O75884 186 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 FSBPO95073 299 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 LUC7L3O95232 432 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CCNDBP1O95273 360 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 PFKMP08237 780 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 LINGO3P0C6S8 592 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 GPR89BP0CG08 455 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 RARBP10826 455 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CHRNB1P11230 501 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 RARGP13631 454 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ATP1A3P13637 1013 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 H2AFXP16104 143 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 POLR2CP19387 275 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 RFC2P35250 354 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ACAA2P42765 397 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CACNB3P54284 484 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 RAB14P61106 215 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 PPP2R2AP63151 447 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 KCNJ10P78508 379 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 DSC2Q02487 901 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 AIMP1Q12904 312 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 GTF2H3Q13889 308 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 NR1D2Q14995 579 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARHGAP19Q14CB8 494 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 UGP2Q16851 508 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 CRB2Q5IJ48 1285 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 AARS2Q5JTZ9 985 aaKnown RBP4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 STXBP5Q5T5C0 1151 aa4.88□□□□□ -1.63
HMGB3P9-201ENST00000441799 MROH9Q5TGP6 573 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms