RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 RYR3Q15413 4870 aa3.97□□□□□ -1.77
CNGA1-203ENST00000420489 IFRD1O00458 451 aaPredicted RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 NTN3O00634 580 aaPredicted RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 IPO8O15397 1037 aaKnown RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 CEACAM4O75871 244 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 SSBP05455 408 aaKnown RBP eCLIP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 SNHG28P0DPA3 235 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 NAT1P18440 290 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 VIPR1P32241 457 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 UGT1A5P35504 534 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 OPRD1P41143 372 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 CCR2P41597 374 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 DRP2Q13474 957 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 ALDH1L2Q3SY69 923 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 LIX1Q8N485 282 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 NUP43Q8NFH3 380 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 MZB1Q8WU39 189 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 RNF38Q9H0F5 515 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 TNFRSF12AQ9NP84 129 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 ST6GALNAC2Q9UJ37 374 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 STRIP2Q9ULQ0 834 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 ANK2Q01484 3957 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 PI4KAP42356 2102 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 NBPF19A0A087WUL8 3843 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 A0A1W2PQJ5 194 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 TPP1O14773 563 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 PPP1R12AO14974 1030 aaPredicted RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 PRKCAP17252 672 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 POLR2BP30876 1174 aaKnown RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 GNALP38405 381 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 NASPP49321 788 aaPredicted RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 PGDP52209 483 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 EPHB3P54753 998 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 MLLT10P55197 1068 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 RHBDF2Q6PJF5 856 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 PAQR3Q6TCH7 311 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 MTERF4Q7Z6M4 381 aaKnown RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 TTC30AQ86WT1 665 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 HIPK1Q86Z02 1210 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 EID2Q8N6I1 236 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 C2orf15Q8WU43 125 aaKnown RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 TCEAL4Q96EI5 215 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 FAM49AQ9H0Q0 323 aaPredicted RBP3.96□□□□□ -1.78
CNGA1-203ENST00000420489 KLHL14Q9P2G3 628 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 SMC3Q9UQE7 1217 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 DOCK5Q9H7D0 1870 aa3.96□□□□□ -1.78
CNGA1-203ENST00000420489 TMEM131Q92545 1883 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 TDRD15B5MCY1 1934 aaKnown RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 CYP2D7A0A087X1C5 515 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 A0A1W2PNU3 283 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 STMND1H3BQB6 276 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 SGK1O00141 431 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 PRRG2O14669 202 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 ARHGEF9O43307 516 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 TLX2O43763 284 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 C22orf31O95567 290 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 CYBBP04839 570 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 GSTM1P09488 218 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 HOXA5P20719 270 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 STAT1P42224 750 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 ZNF143P52747 638 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 ITGA1P56199 1179 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 NXPH1P58417 271 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 SNAP25P60880 206 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 FANCCQ00597 558 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 DNAJC3Q13217 504 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 DRAP1Q14919 205 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 C10orf62Q5T681 223 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 RD3Q7Z3Z2 195 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 LCORLQ8N3X6 602 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 FBXO39Q8N4B4 442 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 HMGB4Q8WW32 186 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 DACT3Q96B18 629 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 ZNF668Q96K58 619 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 CNTD2Q9H8S5 307 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 GP6Q9HCN6 339 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 WHRNQ9P202 907 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 NUDT5Q9UKK9 219 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 NOL7Q9UMY1 257 aaKnown RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 FGF10O15520 208 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 DNAJC6O75061 913 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 SPATA31D3P0C874 917 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 KRT10P13645 584 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 PDE6AP16499 860 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 IGFBP2P18065 325 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 HOXC13P31276 330 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 BCAT1P54687 386 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 ZNF77Q15935 545 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 EIF2S3LQ2VIR3 472 aaKnown RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 CCDC92Q53HC0 331 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 TNNI3KQ59H18 835 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 SLC9C2Q5TAH2 1124 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 CES4AQ5XG92 561 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 UNC5AQ6ZN44 842 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 SPATA31D4Q6ZUB0 917 aa3.95□□□□□ -1.78
CNGA1-203ENST00000420489 DCP2Q8IU60 420 aaKnown RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 ZNF444Q8N0Y2 327 aaPredicted RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 TXNDC5Q8NBS9 432 aaKnown RBP3.95□□□□□ -1.78
CNGA1-203ENST00000420489 MAPK15Q8TD08 544 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms