RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 MTDHQ86UE4 582 aaKnown RBP18.77■□□□□ 0.6
SHANK3-202ENST00000414786 CCDC54Q8NEL0 328 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 KAT2AQ92830 837 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 PSMD4P55036 377 aaKnown RBP18.77■□□□□ 0.6
SHANK3-202ENST00000414786 PPP2R2BQ00005 443 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 TAF2Q6P1X5 1199 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 USP45Q70EL2 814 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 DEFB107AQ8IZN7 70 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 ZNF248Q8NDW4 579 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 OR5T3Q8NGG3 340 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 PRCCQ92733 491 aaPredicted RBP18.77■□□□□ 0.6
SHANK3-202ENST00000414786 MYPNQ86TC9 1320 aa18.77■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF7P17097 686 aaPredicted RBP18.77■□□□□ 0.59
SHANK3-202ENST00000414786 ARMCX6Q7L4S7 300 aa18.77■□□□□ 0.59
SHANK3-202ENST00000414786 POU5F2Q8N7G0 328 aa18.77■□□□□ 0.59
SHANK3-202ENST00000414786 GTF3C2Q8WUA4 911 aaPredicted RBP18.77■□□□□ 0.59
SHANK3-202ENST00000414786 NKD1Q969G9 470 aa18.77■□□□□ 0.59
SHANK3-202ENST00000414786 PHF24Q9UPV7 400 aa18.77■□□□□ 0.59
SHANK3-202ENST00000414786 MORC2Q9Y6X9 1032 aaPredicted RBP18.77■□□□□ 0.59
SHANK3-202ENST00000414786 H3BRB1 525 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 FOXN3O00409 490 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 MICAL2O94851 1124 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 VDRP11473 427 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 S100GP29377 79 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ARHGDIBP52566 201 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 SCUBE1Q8IWY4 988 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 OR52L1Q8NGH7 329 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 SLC9A6Q92581 669 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 KCNN2Q9H2S1 579 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 PZPP20742 1482 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 CCL16O15467 120 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 PCCBP05166 539 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 PTPN5P54829 565 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 FBXO47Q5MNV8 452 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 KBTBD7Q8WVZ9 684 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 PTGFRNQ9P2B2 879 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 RIMKLBQ9ULI2 386 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 RPAP1Q9BWH6 1393 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 A0A088AWK7 358 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 INSRRP14616 1297 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 CPA3P15088 417 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF10P21506 573 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ADORA2AP29274 412 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 IL12RB1P42701 662 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ZIK1Q3SY52 487 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 SUGP1Q8IWZ8 645 aaKnown RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 TKTL2Q9H0I9 626 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 SLC12A4Q9UP95 1085 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 PPP1R37O75864 691 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 KCNJ5P48544 419 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 MPPE1Q53F39 396 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ARMC3Q5W041 872 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 LRRC34Q8IZ02 419 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF611Q8N823 705 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 C5orf34Q96MH7 638 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 PIGUQ9H490 435 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 KDM6AO15550 1401 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 TRAV19A0A0A6YYK7 116 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ADCYAP1R1P41586 468 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 SLC1A6P48664 564 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 EIF2B2P49770 351 aaKnown RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 RETSATQ6NUM9 610 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 KCTD8Q6ZWB6 473 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 FAM126BQ8IXS8 530 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 SPATA6LQ8N4H0 392 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ACOT9Q9Y305 439 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF189O75820 626 aaPredicted RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 NR2F1P10589 423 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ITGA9Q13797 1035 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 LRP8Q14114 963 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 FASTKQ14296 549 aaKnown RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 ZCWPW2Q504Y3 356 aa18.76■□□□□ 0.59
SHANK3-202ENST00000414786 DDX18Q9NVP1 670 aaKnown RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 INTS10Q9NVR2 710 aaKnown RBP18.76■□□□□ 0.59
SHANK3-202ENST00000414786 FOXO4P98177 505 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 PYDC2Q56P42 97 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF484Q5JVG2 852 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 ADGRG6Q86SQ4 1221 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 SLC41A1Q8IVJ1 513 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 PPP1R16AQ96I34 528 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 STX16-NPEPL1H3BU86 382 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 STX16O14662 325 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 EPN2O95208 641 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 NDUFA5Q16718 116 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 KBTBD12Q3ZCT8 623 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 KCNMB4Q86W47 210 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 TBC1D13Q9NVG8 400 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 ELOVL2Q9NXB9 296 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 RHOBTB3O94955 611 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 PPM1AP35813 382 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 GDI2P50395 445 aaKnown RBP18.75■□□□□ 0.59
SHANK3-202ENST00000414786 RIN1Q13671 783 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 RFX4Q33E94 735 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 UAP1L1Q3KQV9 507 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 KRT74Q7RTS7 529 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 TMPRSS9Q7Z410 1059 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 GPSM1Q86YR5 675 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 CISHQ9NSE2 258 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 EHD3Q9NZN3 535 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 RAD54BQ9Y620 910 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms