RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 RPP40O75818 363 aaKnown RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 ALDH1A2O94788 518 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 EPN2O95208 641 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 KAT7O95251 611 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 ECEL1O95672 775 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 APBB3O95704 486 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 ZBED1O96006 694 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 HPDP32754 393 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 CHKAP35790 457 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 GRIA2P42262 883 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 PTGIRP43119 386 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 TNFRSF4P43489 277 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 MMP13P45452 471 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 PXNP49023 591 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 GTF2A1P52655 376 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 PLTPP55058 493 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 MAGOHP61326 146 aaKnown RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 YWHAGP61981 247 aaKnown RBP eCLIP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 DMC1Q14565 340 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 MESDQ14696 234 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 E2F5Q15329 346 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 CNGA2Q16280 664 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 ANO4Q32M45 955 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 PPM1JQ5JR12 505 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 EOGTQ5NDL2 527 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 NAIF1Q69YI7 327 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 PM20D1Q6GTS8 502 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 GJB7Q6PEY0 223 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 RHBDF2Q6PJF5 856 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 LCLAT1Q6UWP7 414 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 TRMT11Q7Z4G4 463 aaKnown RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 C11orf74Q86VG3 221 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 SCML4Q8N228 414 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 RIBC1Q8N443 379 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 SH2D3CQ8N5H7 860 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 RBBP8NLQ8NC74 664 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 CCDC197Q8NCU1 140 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 ATL2Q8NHH9 583 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 ZNF564Q8TBZ8 553 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 IPO4Q8TEX9 1081 aaKnown RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 RNF139Q8WU17 664 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 ART4Q93070 314 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 SEC16BQ96JE7 1060 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 CCDC114Q96M63 670 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 DPH5Q9H2P9 285 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 YY1AP1Q9H869 796 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 OSGEPQ9NPF4 335 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 CNGB3Q9NQW8 809 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 SAMD15Q9P1V8 674 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 KMT2BQ9UMN6 2715 aaPredicted RBP10.71□□□□□ -0.69
COL5A1-202ENST00000371820 CAPN7Q9Y6W3 813 aa10.71□□□□□ -0.69
COL5A1-202ENST00000371820 CFAP73A6NFT4 308 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 M0QYV0 167 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 RASGRF2O14827 1237 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 AXIN1O15169 862 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 STC2O76061 302 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 TBX18O95935 607 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 KRT5P13647 590 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 COMTP21964 271 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 SLC8A1P32418 973 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 LIG3P49916 1009 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 LIMK1P53667 647 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 MRPS25P82663 173 aaKnown RBP10.7□□□□□ -0.7
COL5A1-202ENST00000371820 ADIGQ0VDE8 80 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 EFEMP1Q12805 493 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 PPP1R7Q15435 360 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 GAB4Q2WGN9 574 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 GRAMD4Q6IC98 578 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 SCD5Q86SK9 330 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 KBTBD6Q86V97 674 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 MIB1Q86YT6 1006 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 CCDC89Q8N998 374 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 TSTD1Q8NFU3 115 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 USP33Q8TEY7 942 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 IRGQQ8WZA9 623 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 RAPGEF5Q92565 580 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 EZH1Q92800 747 aaPredicted RBP10.7□□□□□ -0.7
COL5A1-202ENST00000371820 PLD4Q96BZ4 506 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 ULBP1Q9BZM6 244 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 PHACTR1Q9C0D0 580 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 ARRDC1-AS1Q9H2J1 176 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 POLMQ9NP87 494 aaPredicted RBP10.7□□□□□ -0.7
COL5A1-202ENST00000371820 ABCC13Q9NSE7 274 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 INTS9Q9NV88 658 aaKnown RBP10.7□□□□□ -0.7
COL5A1-202ENST00000371820 POLR3BQ9NW08 1133 aaPredicted RBP10.7□□□□□ -0.7
COL5A1-202ENST00000371820 OSER1Q9NX31 292 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 MARK1Q9P0L2 795 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 MARCH2Q9P0N8 246 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 MMP17Q9ULZ9 603 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL5A1-202ENST00000371820 ACTL7BQ9Y614 415 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 SCINQ9Y6U3 715 aa10.7□□□□□ -0.7
COL5A1-202ENST00000371820 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
COL5A1-202ENST00000371820 A0A0A0MRY4 1105 aa10.69□□□□□ -0.7
COL5A1-202ENST00000371820 TBC1D3BA6NDS4 549 aa10.69□□□□□ -0.7
COL5A1-202ENST00000371820 K7EQS6 105 aa10.69□□□□□ -0.7
COL5A1-202ENST00000371820 SMAPO00193 183 aa10.69□□□□□ -0.7
COL5A1-202ENST00000371820 MDM4O15151 490 aa10.69□□□□□ -0.7
COL5A1-202ENST00000371820 ZBTB24O43167 697 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms