RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 IDUAP35475 653 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TGFB2P61812 414 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TAP1Q03518 808 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 RALGDSQ12967 914 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 DGKZQ13574 1117 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 NIPAL1Q6NVV3 410 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 NEPROQ6NW34 567 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 ILDR2Q71H61 639 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 SNX29P2Q8IUI4 249 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TDRD5Q8NAT2 981 aaKnown RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TMEM35BQ8NCS4 154 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 RP9Q8TA86 221 aaKnown RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 ACMSDQ8TDX5 336 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 BORCS5Q969J3 196 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 DUS3LQ96G46 650 aaKnown RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 NANOGQ9H9S0 305 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 CAB39LQ9H9S4 337 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 THEGQ9P2T0 379 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 CNOT6Q9ULM6 557 aaKnown RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 ERGIC3Q9Y282 383 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 FNDC1Q4ZHG4 1894 aaPredicted RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TMEM233B4DJY2 109 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 AQP9O43315 295 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TBXAS1P24557 533 aaPredicted RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 PTPN9P43378 593 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 GNA12Q03113 381 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 PRKCQQ04759 706 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 DPYSQ14117 519 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 EML3Q32P44 896 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TMEM214Q6NUQ4 689 aaKnown RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 NIPA1Q7RTP0 329 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 CADM3Q8N126 398 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 LRRC39Q96DD0 335 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 MCRS1Q96EZ8 462 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 HAUS8Q9BT25 410 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 GATA5Q9BWX5 397 aaPredicted RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 MTMR12Q9C0I1 747 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 COA1Q9GZY4 146 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TRPC7Q9HCX4 862 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 SNX15Q9NRS6 342 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 RIC8BQ9NVN3 520 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 SLC8A2Q9UPR5 921 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 COL11A1P12107 1806 aaPredicted RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 JRKO75564 520 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 STAM2O75886 525 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 ZNF12P17014 697 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 HOXA10P31260 410 aaPredicted RBP11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 ABCG1P45844 678 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 CDH6P55285 790 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 RHDQ02161 417 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 GBE1Q04446 702 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 LRP8Q14114 963 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 RFTN1Q14699 578 aaPredicted RBP11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 CES3Q6UWW8 571 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PIGZQ86VD9 579 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 NETO2Q8NC67 525 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PPP1R14CQ8TAE6 165 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 RSAD1Q9HA92 442 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 CXorf21Q9HAI6 301 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 ANLNQ9NQW6 1124 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 AP4S1Q9Y587 144 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 GHRHRQ02643 423 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PGM5Q15124 567 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 GPR107Q5VW38 600 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 C16orf89Q6UX73 402 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 IGFN1Q86VF2 1251 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 HERC6Q8IVU3 1022 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PELI3Q8N2H9 469 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PCYOX1LQ8NBM8 494 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PTCD2Q8WV60 388 aaKnown RBP11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 DLG3Q92796 817 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 KHSRPQ92945 711 aaKnown RBP eCLIP11.9□□□□□ -0.52e-7■■■□□ 15.6
SMARCA1-201ENST00000371121 TAAR1Q96RJ0 339 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 APBA2Q99767 749 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 FBXO40Q9UH90 709 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 DCDC2Q9UHG0 476 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 NOX1Q9Y5S8 564 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 H7C0C1 242 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 ACOX3O15254 700 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 TADA2AO75478 443 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 ERVK-10P10266 1014 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PROZP22891 400 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 NFKBIAP25963 317 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PTGER2P43116 358 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 ATP5OP48047 213 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PSMC1P62191 440 aaKnown RBP11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 PPP4R4Q6NUP7 873 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 SCARA5Q6ZMJ2 495 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 SNX31Q8N9S9 440 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 C1QTNF1Q9BXJ1 281 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 TDRD1Q9BXT4 1180 aaKnown RBP11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 SIAEQ9HAT2 523 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 SARDHQ9UL12 918 aa11.9□□□□□ -0.5
SMARCA1-201ENST00000371121 KCNU1A8MYU2 1149 aa11.89□□□□□ -0.51
SMARCA1-201ENST00000371121 GABBR2O75899 941 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms