RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TRIM60Q495X7 471 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 UCMAQ8WVF2 138 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 MAF1Q9H063 256 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 POMKQ9H5K3 350 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 ATXN2Q99700 1313 aaKnown RBP17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 IGLV3-22A0A075B6J6 115 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 SNUPNO95149 360 aaKnown RBP17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 TP53BP2Q13625 1128 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 PTPN20Q4JDL3 420 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 B4GALNT2Q8NHY0 566 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 MARCH2Q9P0N8 246 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 PNMA8BQ9ULN7 279 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 HDAC3O15379 428 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 HALP42357 657 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 TUFMP49411 452 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 HADHBP55084 474 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 KIAA2013Q8IYS2 634 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 TRAPPC9Q96Q05 1148 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 UBA2Q9UBT2 640 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 TMCC3Q9ULS5 477 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 CLCA2Q9UQC9 943 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 IGKV6D-41A0A0C4DH26 115 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 PSMD12O00232 456 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 CLOCKO15516 846 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 LZTS3O60299 673 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 EFCAB14O75071 495 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 ERCC2P18074 760 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 CRADDP78560 199 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 WASHC5Q12768 1159 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 ITIH5Q86UX2 942 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 HES2Q9Y543 173 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 NFKB1P19838 968 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 TRAF2Q12933 501 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 ZC3H12AQ5D1E8 599 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 MAP1SQ66K74 1059 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 APTXQ7Z2E3 356 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 NET1Q7Z628 596 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 NMD3Q96D46 503 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 ACE2Q9BYF1 805 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 LRRC4CQ9HCJ2 640 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 DMAC2Q9NW81 257 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 ITGA2BP08514 1039 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 LTA4HP09960 611 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 CCT8P50990 548 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 CLCN5P51795 746 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 CAMK2GQ13555 558 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 NOMO1Q15155 1222 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 TRIM16LQ309B1 348 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 GLT6D1Q7Z4J2 308 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 JOSD2Q8TAC2 188 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 PGLYRP2Q96PD5 576 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 TSPAN18Q96SJ8 248 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 LRMDAQ9H2I8 198 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 WDR41Q9HAD4 459 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 PTCH2Q9Y6C5 1203 aa17.37■□□□□ 0.37
TRAPPC11-201ENST00000334690 DISP2A7MBM2 1401 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 B4GALT5O43286 388 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 ZNF682O95780 498 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 VAC14Q08AM6 782 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 STK40Q8N2I9 435 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 FAM192AQ9GZU8 254 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 FZD1Q9UP38 647 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 FARP2O94887 1054 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 PIK3CGP48736 1102 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 USP50Q70EL3 339 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 LGI2Q8N0V4 545 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 ZBTB10Q96DT7 871 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 SEPHS2Q99611 448 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 TMEM106CQ9BVX2 250 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 MRPL9Q9BYD2 267 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 PCDH18Q9HCL0 1135 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 CNGB3Q9NQW8 809 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 R3HDM2Q9Y2K5 976 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 GNG14A0A1W2PPG7 69 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 CCNT2O60583 730 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 GOT1P17174 413 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 NUMBP49757 651 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 SLC39A12Q504Y0 691 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 STAG3L4Q8TBR4 150 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 TADA1Q96BN2 335 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 C9orf16Q9BUW7 83 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 COG5Q9UP83 839 aa17.36■□□□□ 0.37
TRAPPC11-201ENST00000334690 SHOX2O60902 331 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 CCNB1P14635 433 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 ARF4P18085 180 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 STRADAQ7RTN6 431 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 ATG16L2Q8NAA4 619 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 ADAM2Q99965 735 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 LNPEPQ9UIQ6 1025 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 DYRK1BQ9Y463 629 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 CCDC154A6NI56 674 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 SNTNA6NMZ2 147 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 BTN3A1O00481 513 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 C4BPAP04003 597 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 LBPP18428 481 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 ABCG1P45844 678 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 SCNN1GP51170 649 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 ENPEPQ07075 957 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 PGS1Q32NB8 556 aa17.35■□□□□ 0.37
TRAPPC11-201ENST00000334690 LCLAT1Q6UWP7 414 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms