RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 SNAP47Q5SQN1 464 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 B3GNT9Q6UX72 402 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 SNX29P2Q8IUI4 249 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 DAW1Q8N136 415 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 AHI1Q8N157 1196 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 TTC13Q8NBP0 860 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 GRK7Q8WTQ7 553 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 RMDN1Q96DB5 314 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 NACC1Q96RE7 527 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 MECRQ9BV79 373 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 PCIF1Q9H4Z3 704 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 MAGEF1Q9HAY2 307 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 ABT1Q9ULW3 272 aaKnown RBP10.52□□□□□ -0.72
SF3B2-201ENST00000322535 SOX13Q9UN79 622 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 PVALEFA0A1B0GWK0 134 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 ILVBLA1L0T0 632 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 MEN1O00255 615 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 ATP2A1O14983 1001 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 TCEA3O75764 348 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 INHBBP09529 407 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 FDX1P10109 184 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 DBTP11182 482 aaKnown RBP10.52□□□□□ -0.73
SF3B2-201ENST00000322535 UBA1P22314 1058 aaKnown RBP10.52□□□□□ -0.73
SF3B2-201ENST00000322535 JAK1P23458 1154 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 KRT20P35900 424 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 RARRES1P49788 294 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 BMXP51813 675 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 CTBSQ01459 385 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 SPRYD7Q5W111 196 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 GATAD2AQ86YP4 633 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 RELL1Q8IUW5 271 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 CHST13Q8NET6 341 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 TBC1D15Q8TC07 691 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 SGF29Q96ES7 293 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 CEP170P1Q96L14 293 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 TARS2Q9BW92 718 aaKnown RBP10.52□□□□□ -0.73
SF3B2-201ENST00000322535 CLPBQ9H078 707 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 KCTD5Q9NXV2 234 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 SLC9A2Q9UBY0 812 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 ARHGAP26Q9UNA1 814 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 ERGIC3Q9Y282 383 aa10.52□□□□□ -0.73
SF3B2-201ENST00000322535 CFAP99D6REC4 459 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 IDH3BO43837 385 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 GGPS1O95749 300 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 ADORA2AP29274 412 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 MRPS22P82650 360 aaKnown RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 HTRA3P83110 453 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 DRAP1Q14919 205 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 PGS1Q32NB8 556 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 METTL2BQ6P1Q9 378 aaKnown RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 FAM122CQ6P4D5 195 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 KCTD20Q7Z5Y7 419 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 DEFB107AQ8IZN7 70 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 AADATQ8N5Z0 425 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 BEND7Q8N7W2 519 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 SLC20A1Q8WUM9 679 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 ZNF696Q9H7X3 374 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 TBC1D22BQ9NU19 505 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 RNF112Q9ULX5 631 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 AP3M1Q9Y2T2 418 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 ST14Q9Y5Y6 855 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 CROCCQ5TZA2 2017 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 MIF4GDA9UHW6 222 aaKnown RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 WDR64B1ANS9 1081 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 CASQ2O14958 399 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 POLR1CO15160 346 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 SLC16A4O15374 487 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 DENRO43583 198 aaKnown RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 ATE1O95260 518 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 MAP3K6O95382 1288 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 PSMC3P17980 439 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 IVDP26440 423 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 CYP2J2P51589 502 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 PRAMEP78395 509 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 IRX4P78413 519 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 FGD3Q5JSP0 725 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 KRT80Q6KB66 452 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 PPP4R4Q6NUP7 873 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 FAM178BQ8IXR5 827 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 SLC15A4Q8N697 577 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 GPRC5AQ8NFJ5 357 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 TRAPPC12Q8WVT3 735 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 TP53INP1Q96A56 240 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 ISOC1Q96CN7 298 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 OMA1Q96E52 524 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 KLC2Q9H0B6 622 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 GHITMQ9H3K2 345 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 TUFT1Q9NNX1 390 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 POMPQ9Y244 141 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 PCDHA10Q9Y5I2 948 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 TRAV6A0A075B6T7 132 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 LPXNO60711 386 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 EIF3EP60228 445 aaKnown RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 XIAPP98170 497 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 SIX1Q15475 284 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 RARS2Q5T160 578 aaKnown RBP10.51□□□□□ -0.73
SF3B2-201ENST00000322535 NDUFAF5Q5TEU4 345 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 GPR107Q5VW38 600 aa10.51□□□□□ -0.73
SF3B2-201ENST00000322535 PRR23BQ6ZRT6 265 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms