RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ICAM1P05362 532 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 THP07101 528 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 PGAM1P18669 254 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 NT5C2P49902 561 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 ATP13A4Q4VNC1 1196 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 GLIS3Q8NEA6 775 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 OR52K1Q8NGK4 314 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 PRMT6Q96LA8 375 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 COLEC11Q9BWP8 271 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 SLC4A5Q9BY07 1137 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 PCDH9Q9HC56 1237 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 A0A0A6YYK5 440 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 EIF2B5Q13144 721 aaKnown RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 LDLRAP1Q5SW96 308 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 NMRAL1Q9HBL8 299 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 IFRD1O00458 451 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 TFECO14948 347 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 RAPSNQ13702 412 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 LGI2Q8N0V4 545 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 ELL3Q9HB65 397 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 ADPRHL2Q9NX46 363 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 SH3GLB1Q9Y371 365 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 TPRKBQ9Y3C4 175 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 BCORL1Q5H9F3 1711 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 A0A1W2PRG6 482 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 GHRP10912 638 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PSMB4P28070 264 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 IQSEC1Q6DN90 963 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 KCNT2Q6UVM3 1135 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 ABRAQ8N0Z2 381 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 ELMO1Q92556 727 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PIGKQ92643 395 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PPP1R14BQ96C90 147 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 TEKT5Q96M29 485 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 QKIQ96PU8 341 aaKnown RBP eCLIP17.06■□□□□ 0.323e-6■□□□□ 10.1
TSPAN3-201ENST00000267970 VAV3Q9UKW4 847 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 SLCO1B7G3V0H7 640 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PIRTP0C851 137 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 YBX3P16989 372 aaKnown RBP eCLIP17.06■□□□□ 0.325e-9■■■□□ 17.7
TSPAN3-201ENST00000267970 CHKAP35790 457 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 BST2Q10589 180 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 FUKQ8N0W3 1084 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 ZNF606Q8WXB4 792 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 C1orf50Q9BV19 199 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 FRMD8Q9BZ67 464 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 BCLAF3A2AJT9 711 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 KHDRBS3O75525 346 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 LYPLA1O75608 230 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 ACADMP11310 421 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PABPC1P11940 636 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 CNTFP26441 200 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 GPR15P49685 360 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 B3GNT6Q6ZMB0 384 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 IQCF2Q8IXL9 164 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 TBATAQ96M53 351 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 MCUBQ9NWR8 336 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PDE9AO76083 593 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 ARHGAP36Q6ZRI8 547 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 GPR156Q8NFN8 814 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 KAT5Q92993 513 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 CPNE1Q99829 537 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 AGO4Q9HCK5 861 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 GP5P40197 560 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 SCRN3Q0VDG4 424 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PDK3Q15120 406 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 Q4G0T1 1027 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 CBWD6Q4V339 395 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 TNS4Q8IZW8 715 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 ATP13A1Q9HD20 1204 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 FBXO10Q9UK96 956 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 COQ6Q9Y2Z9 468 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 PLEKHG2Q9H7P9 1386 aa17.06■□□□□ 0.32
TSPAN3-201ENST00000267970 ATP6AP2A0A1C7CYW4 349 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 ATP6AP2O75787 350 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 CYP2A7P20853 494 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 CHN2P52757 468 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 HUNKP57058 714 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 NDUFAF6Q330K2 333 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 C8orf59Q8N0T1 100 aaPredicted RBP17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 DEFB106AQ8N104 65 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 FAM151AQ8WW52 585 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 TBC1D13Q9NVG8 400 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 SNCAIPQ9Y6H5 919 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 XRCC4Q13426 336 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 OLFML2AQ68BL7 652 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 GRIN3AQ8TCU5 1115 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 SLC35C2Q9NQQ7 365 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 PXMP2Q9NR77 195 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 LIN7AO14910 233 aaPredicted RBP17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 MAP3K13O43283 966 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 DYRK3O43781 588 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 CEBPGP53567 150 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 SLC2A14Q8TDB8 520 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms