RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PLK1P53350 603 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 ATXN3P54252 364 aaPredicted RBP22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 ZNF177Q13360 481 aaPredicted RBP22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 C5orf22Q49AR2 442 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 PSAPL1Q6NUJ1 521 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 CAVIN1Q6NZI2 390 aaKnown RBP22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 ZNF683Q8IZ20 524 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 ALG14Q96F25 216 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 FEM1AQ9BSK4 669 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 MIR1-1HGQ9H1L0 117 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 C6orf106Q9H6K1 298 aaPredicted RBP22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 METTL5Q9NRN9 209 aaKnown RBP22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 SUSD2Q9UGT4 822 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 CEP192Q8TEP8 1941 aa22.09■■□□□ 1.13
PPP4R1-228ENST00000584074 ITIH6Q6UXX5 1313 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 EDDM13A0A1B0GTR0 161 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 TARSL2A2RTX5 802 aaKnown RBP22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 ARHGAP33O14559 1287 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 CLDN11O75508 207 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 CNTN5O94779 1100 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 OXCT1P55809 520 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 N4BP2L1Q5TBK1 243 aaPredicted RBP22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 TRIM72Q6ZMU5 477 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 ARCQ7LC44 396 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 BNIPLQ7Z465 357 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 ZCCHC9Q8N567 271 aaKnown RBP22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 OR2I1PQ8NGU4 316 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 C11orf70Q9BRQ4 267 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 PABPC3Q9H361 631 aaKnown RBP22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 EIF2B4Q9UI10 523 aaKnown RBP22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 PAXBP1Q9Y5B6 917 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 GON4LQ3T8J9 2241 aa22.08■■□□□ 1.13
PPP4R1-228ENST00000584074 GIPC1O14908 333 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 RNASEH1O60930 286 aaKnown RBP22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 SEMA4FO95754 770 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 UNGP13051 313 aaPredicted RBP22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 VAV1P15498 845 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 NOVA1P51513 510 aaKnown RBP22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 CDH4P55283 916 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 ATP11AP98196 1134 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 SULT2A1Q06520 285 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 CST6Q15828 149 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 TTC31Q49AM3 519 aaPredicted RBP22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 ALFQ53S48 1182 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 SH3PXD2AQ5TCZ1 1133 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 MMAAQ8IVH4 418 aaKnown RBP22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 STK40Q8N2I9 435 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 MINDY1Q8N5J2 469 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 GANCQ8TET4 914 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 PTPRN2Q92932 1015 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 FAM129BQ96TA1 746 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 BPIFA3Q9BQP9 254 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 BTBD1Q9H0C5 482 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 PCED1AQ9H1Q7 454 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 SERGEFQ9UGK8 458 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 TBC1D30Q9Y2I9 924 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 OR51B4Q9Y5P0 310 aa22.07■■□□□ 1.12
PPP4R1-228ENST00000584074 A0A1B0GTW7 788 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 MID1O15344 667 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 TEX33O43247 280 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 GJB6O95452 261 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 SYPP08247 313 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 RDXP35241 583 aaKnown RBP22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 NNMTP40261 264 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 PTP4A2Q12974 167 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 CLEC16AQ2KHT3 1053 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 RAB6CQ53S08 254 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 FAM131BQ86XD5 332 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 SNX19Q92543 992 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 C1orf74Q96LT6 269 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 RAB6CQ9H0N0 254 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 TMEM51Q9NW97 253 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 FBXL12Q9NXK8 326 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 VPS28Q9UK41 221 aa22.06■■□□□ 1.12
PPP4R1-228ENST00000584074 DRGXA6NNA5 263 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 ENDOD1O94919 500 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 ARTNQ5T4W7 220 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 LRRC31Q6UY01 552 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 USP30Q70CQ3 517 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 C1orf216Q8TAB5 229 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 JOSD2Q8TAC2 188 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 FRS2Q8WU20 508 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 RXFP2Q8WXD0 754 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 PPP1R9BQ96SB3 815 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 MUC3BQ9H195 1237 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 SGK2Q9HBY8 427 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 MPP6Q9NZW5 540 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 SCML1Q9UN30 329 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 NCKAP1Q9Y2A7 1128 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 SLCO1B1Q9Y6L6 691 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 PCDH15Q96QU1 1955 aa22.05■■□□□ 1.12
PPP4R1-228ENST00000584074 E9PAM4 449 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 BCAT2O15382 392 aaPredicted RBP22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 SRGAP2O75044 1071 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 CSRP1P21291 193 aaKnown RBP22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 SLC8A1P32418 973 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 NSFP46459 744 aaKnown RBP22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 PSMD8P48556 350 aa22.04■■□□□ 1.12
PPP4R1-228ENST00000584074 GRIK2Q13002 908 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms