RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TMEM51Q9NW97 253 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 MKS1Q9NXB0 559 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 TET1Q8NFU7 2136 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 ARHGAP42A6NI28 874 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 USP12O75317 370 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 JCHAINP01591 159 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 POLBP06746 335 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 GATMP50440 423 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 NAB1Q13506 487 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 MROH9Q5TGP6 573 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 MSANTD2Q6P1R3 559 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 ARHGAP12Q8IWW6 846 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 ARHGAP18Q8N392 663 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 LZTR1Q8N653 840 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 GBP7Q8N8V2 638 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-211ENST00000568373 ZNF296Q8WUU4 475 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-211ENST00000568373 RMDN2Q96LZ7 410 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 HAUS2Q9NVX0 235 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 GGT7Q9UJ14 662 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 VANGL2Q9ULK5 521 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 DFFAO00273 331 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 ALDH2P05091 517 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 CCNCP24863 283 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 USP46P62068 366 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 MGAT5Q09328 741 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 TIFABQ6ZNK6 161 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 CDHR3Q6ZTQ4 885 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 OTOAQ7RTW8 1153 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 ATAD1Q8NBU5 361 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 SEPT8Q92599 483 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 MANSC1Q9H8J5 431 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 RXFP1Q9HBX9 757 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 MARCH5Q9NX47 278 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 IL37Q9NZH6 218 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 BFARQ9NZS9 450 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 TLR6Q9Y2C9 796 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 RPS6KL1Q9Y6S9 549 aa18.55■□□□□ 0.56
SMPD3-211ENST00000568373 PITPNM1O00562 1244 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 UBOX5O94941 541 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 MOCS2O96007 188 aaPredicted RBP18.54■□□□□ 0.56
SMPD3-211ENST00000568373 FGFR3P22607 806 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 NRG1Q02297 640 aaPredicted RBP18.54■□□□□ 0.56
SMPD3-211ENST00000568373 SPANXN3Q5MJ09 141 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 ZNF449Q6P9G9 518 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 ATPAF2Q8N5M1 289 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 TTC9BQ8N6N2 239 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 DNAAF3Q8N9W5 541 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 B3GALT6Q96L58 329 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 LRRC40Q9H9A6 602 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 GMIPQ9P107 970 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 LRFN2Q9ULH4 789 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 PLLPQ9Y342 182 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 HS3ST4Q9Y661 456 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 SLC11A1P49279 550 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 TUBP50607 506 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 GALNTL6Q49A17 601 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 FAM133BQ5BKY9 247 aaKnown RBP18.54■□□□□ 0.56
SMPD3-211ENST00000568373 ARHGAP36Q6ZRI8 547 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 FITM2Q8N6M3 262 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 CNTD1Q8N815 330 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 PTPRN2Q92932 1015 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 SLC39A13Q96H72 371 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 ALG13Q9NP73 1137 aaKnown RBP18.54■□□□□ 0.56
SMPD3-211ENST00000568373 SLC17A6Q9P2U8 582 aa18.54■□□□□ 0.56
SMPD3-211ENST00000568373 FAM92AA1XBS5 289 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 E9PAM4 449 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 CACNG3O60359 315 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 DNAJC8O75937 253 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-211ENST00000568373 SLC2A3P11169 496 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 SERPINB4P48594 390 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 PRPSAP1Q14558 356 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 PACS1Q6VY07 963 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 SH3TC2Q8TF17 1288 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 CERS2Q96G23 380 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 C1orf74Q96LT6 269 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 SLC13A1Q9BZW2 595 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 MAFKO60675 156 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 CCNB1P14635 433 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 MLLT6P55198 1093 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-211ENST00000568373 TCTN1Q2MV58 587 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 FUT10Q6P4F1 479 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 CES3Q6UWW8 571 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 FAM43BQ6ZT52 329 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-211ENST00000568373 TMEM135Q86UB9 458 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 KLHDC8BQ8IXV7 354 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 RTL3Q8N8U3 475 aaKnown RBP18.53■□□□□ 0.56
SMPD3-211ENST00000568373 THOC1Q96FV9 657 aaKnown RBP18.53■□□□□ 0.56
SMPD3-211ENST00000568373 FCRL3Q96P31 734 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-211ENST00000568373 SLC39A8Q9C0K1 460 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 PCMTD2Q9NV79 361 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 NDFIP2Q9NV92 336 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 HCSTQ9UBK5 93 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 USH1CQ9Y6N9 552 aa18.53■□□□□ 0.56
SMPD3-211ENST00000568373 HOXA2O43364 376 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 CPB1P15086 417 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 YWHAQP27348 245 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 CRHR1P34998 444 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 ARPP19P56211 112 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 TBX4P57082 545 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 CCDC15Q0P6D6 951 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms