RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 WNT6Q9Y6F9 365 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 FANCMQ8IYD8 2048 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 A0A0D9SEW6 157 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 H3BRJ5 948 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 CHADO15335 359 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 LUC7L3O95232 432 aaKnown RBP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 CKMP06732 381 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 MMP2P08253 660 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 IGFBP4P22692 258 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 HLA-FP30511 346 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 CD68P34810 354 aaPredicted RBP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 NR2C2P49116 596 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 NRLP54845 237 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 ZP2Q05996 745 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 ENPP2Q13822 863 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 SETD3Q86TU7 594 aaPredicted RBP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 ACTL9Q8TC94 416 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 BPIFB1Q8TDL5 484 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 LRRN4Q8WUT4 740 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 IRF7Q92985 503 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 E2F7Q96AV8 911 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 GCNAQ96QF7 691 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 IL12RB2Q99665 862 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 ANKZF1Q9H8Y5 726 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 SLC27A6Q9Y2P4 619 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 A0A1B0GVM2 712 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ANTXRLA6NF34 631 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 TCAF2A6NFQ2 919 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 APOL1O14791 398 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 SCAMP3O14828 347 aaKnown RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CEP104O60308 925 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 MOCS2O96007 188 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 GLDCP23378 1020 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ACVRL1P37023 503 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 COILP38432 576 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 MAGEA6P43360 314 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 HARS2P49590 506 aaKnown RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 TPI1P60174 286 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 IFI35P80217 286 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 DHCR24Q15392 516 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CCDC85BQ15834 202 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 PTPRNQ16849 979 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 FAM182AQ5T1J6 154 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ST13P5Q8NFI4 369 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 TTC17Q96AE7 1141 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 HMCESQ96FZ2 354 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 FAM118BQ9BPY3 351 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 KXD1Q9BQD3 176 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 AP1M1Q9BXS5 423 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ATP8A1Q9Y2Q0 1164 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ILVBLA1L0T0 632 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 RNF103O00237 685 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 RIOK3O14730 519 aaKnown RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CREB3O43889 395 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 BMP1P13497 986 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 KCNA5P22460 613 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 MZF1P28698 734 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CD70P32970 193 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 GJC1P36383 396 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 AVPR1AP37288 418 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 SLC11A2P49281 568 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 FNTAP49354 379 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CLCN6P51797 869 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 LMAN2Q12907 356 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ZBTB17Q13105 803 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 MSLNQ13421 630 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 FZD5Q13467 585 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 PPP6R3Q5H9R7 873 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 HJURPQ8NCD3 748 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ZFYVE19Q96K21 471 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CAPZA3Q96KX2 299 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 EPAS1Q99814 870 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 C10orf88Q9H8K7 445 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 SLC2A4RGQ9NR83 387 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 FARP1Q9Y4F1 1045 aaPredicted RBP6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ACTL7AQ9Y615 435 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 MYO15AQ9UKN7 3530 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 MUSKO15146 869 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 TRIM24O15164 1050 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 PRAMEF11O60813 436 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CLDN11O75508 207 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 TJP3O95049 919 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CR2P20023 1033 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 LLGL1Q15334 1064 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 SEL1L2Q5TEA6 688 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 KCTD11Q693B1 232 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CES5AQ6NT32 575 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 APCDD1Q8J025 514 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 CNTD1Q8N815 330 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 DEPDC1BQ8WUY9 529 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 FEM1AQ9BSK4 669 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 ECT2Q9H8V3 914 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 PIDD1Q9HB75 910 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 GRHL1Q9NZI5 618 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 TBC1D14Q9P2M4 693 aa6.93□□□□□ -1.3
LINC00517-202ENST00000554257 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 HACD1B0YJ81 288 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 F5H5T6 163 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 KDELR3O43731 214 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms