RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PNMA6AP0CW24 399 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 DRD3P35462 400 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 MARSP56192 900 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 ST8SIA6P61647 398 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 YWHAZP63104 245 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 RACK1P63244 317 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 CYP4F3Q08477 520 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 DNAJC3Q13217 504 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 ARID5BQ14865 1188 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 ARHGAP44Q17R89 818 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 CXorf57Q6NSI4 855 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 DHRS13Q6UX07 377 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 ADAT2Q7Z6V5 191 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 C14orf80Q86SX3 495 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 IRF2BP1Q8IU81 584 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 PASD1Q8IV76 773 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 ELOA2Q8IYF1 753 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 DEFB106AQ8N104 65 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 CCAR2Q8N163 923 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 FRS2Q8WU20 508 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 HNRNPLLQ8WVV9 542 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 CPXM1Q96SM3 734 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 CDC6Q99741 560 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 IRX2Q9BZI1 471 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 ADAMTS1Q9UHI8 967 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 NCKAP1Q9Y2A7 1128 aa11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.93□□□□□ -0.5
PRPF40B-212ENST00000551111 CHD5Q8TDI0 1954 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 A0A1B0GTQ1 180 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 EDDM13A0A1B0GTR0 161 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 I6L893 689 aaPredicted RBP11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 CAPN9O14815 690 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 TNFSF14O43557 240 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 RTN2O75298 545 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 TFE3P19532 575 aaPredicted RBP11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 GNA15P30679 374 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 ACADSBP45954 432 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 CCT8P50990 548 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 ADPRHP54922 357 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 CETN1Q12798 172 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 BNIP3Q12983 259 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 PAK1Q13153 545 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 PDCLQ13371 301 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 POM121L1PQ3SYA9 428 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 OTUD1Q5VV17 481 aaPredicted RBP11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 FBXL22Q6P050 247 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 TRIM65Q6PJ69 517 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 FOXR2Q6PJQ5 311 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 OR2T34Q8NGX1 318 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 OR14C36Q8NHC7 312 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 STK32AQ8WU08 396 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 BTN2A3PQ96KV6 586 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 OMDQ99983 421 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 DDX50Q9BQ39 737 aaKnown RBP11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 THAP9Q9H5L6 903 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 POPDC2Q9HBU9 364 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 SIX2Q9NPC8 291 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 ANLNQ9NQW6 1124 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 ARHGAP20Q9P2F6 1191 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 HOOK1Q9UJC3 728 aaKnown RBP11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 CA5BQ9Y2D0 317 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 CEP83Q9Y592 693 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 SNX10Q9Y5X0 201 aa11.92□□□□□ -0.5
PRPF40B-212ENST00000551111 BICDL2A1A5D9 508 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 TARSL2A2RTX5 802 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 IL1BP01584 269 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 APOEP02649 317 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 SRPRAP08240 638 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 GOT1P17174 413 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 CD38P28907 300 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 MAT2AP31153 395 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 USP8P40818 1118 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 GRK6P43250 576 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 NUCB2P80303 420 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 SUZ12Q15022 739 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 KIF26BQ2KJY2 2108 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 ARTNQ5T4W7 220 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 FAM183BPQ6ZVS7 135 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 BEND5Q7L4P6 421 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 CREBRFQ8IUR6 639 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 KDM1BQ8NB78 822 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 SAP25Q8TEE9 199 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 BBC3Q96PG8 261 aaPredicted RBP11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 SLC2A13Q96QE2 648 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 ACE2Q9BYF1 805 aaPredicted RBP11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 PLCB1Q9NQ66 1216 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 AASDHPPTQ9NRN7 309 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 TMPRSS4Q9NRS4 437 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 DDIT4Q9NX09 232 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 SCML1Q9UN30 329 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 OR51B4Q9Y5P0 310 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 PTPRQQ9UMZ3 2332 aa11.91□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3DA0A087WVF3 549 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3IA0A087WXS9 549 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3EA0A087X179 549 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3KA0A087X1G2 549 aa11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TYW5A2RUC4 315 aaKnown RBP11.9□□□□□ -0.5
PRPF40B-212ENST00000551111 TBC1D3FA6NER0 549 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms