RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 SYPP08247 313 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 CHRNB2P17787 502 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 STK19P49842 368 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-210ENST00000471445 DEUP1Q05D60 604 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 TYRO3Q06418 890 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 SULT2A1Q06520 285 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 C9orf64Q5T6V5 341 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 RNF219Q5W0B1 726 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-210ENST00000471445 C14orf80Q86SX3 495 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 ZNF683Q8IZ20 524 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 MINDY1Q8N5J2 469 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 OR52K2Q8NGK3 314 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 ERGIC2Q96RQ1 377 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 GTPBP2Q9BX10 602 aaKnown RBP21.58■■□□□ 1.05
SREBF1-210ENST00000471445 BTBD1Q9H0C5 482 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 PABPC3Q9H361 631 aaKnown RBP21.58■■□□□ 1.05
SREBF1-210ENST00000471445 C6orf106Q9H6K1 298 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-210ENST00000471445 WDCPQ9H6R7 721 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 SLCO3A1Q9UIG8 710 aa21.58■■□□□ 1.05
SREBF1-210ENST00000471445 LRRC10BA6NIK2 292 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 GOLGA8SH3BPF8 625 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 GIPC1O14908 333 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 SEMA4FO95754 770 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 F9P00740 461 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 MMP8P22894 467 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 STAT1P42224 750 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 VASPP50552 380 aaPredicted RBP21.57■■□□□ 1.04
SREBF1-210ENST00000471445 CDH4P55283 916 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 GRIK2Q13002 908 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 SEMA3BQ13214 749 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 USP30Q70CQ3 517 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 SND1Q7KZF4 910 aaKnown RBP eCLIP21.57■■□□□ 1.041e-12■■■□□ 14.9
SREBF1-210ENST00000471445 C1orf216Q8TAB5 229 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 PTPRN2Q92932 1015 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 RPL10LQ96L21 214 aaKnown RBP21.57■■□□□ 1.04
SREBF1-210ENST00000471445 SGK2Q9HBY8 427 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 METTL5Q9NRN9 209 aaKnown RBP21.57■■□□□ 1.04
SREBF1-210ENST00000471445 DNAAF2Q9NVR5 837 aaKnown RBP21.57■■□□□ 1.04
SREBF1-210ENST00000471445 PAXBP1Q9Y5B6 917 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 TMEM131Q92545 1883 aa21.57■■□□□ 1.04
SREBF1-210ENST00000471445 UPK3BL1B0FP48 263 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 UPK3BL2E5RIL1 263 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 CLDN11O75508 207 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 GJB3O75712 270 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 CEACAM1P13688 526 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 NUMBP49757 651 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 CST6Q15828 149 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 TRIM72Q6ZMU5 477 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 AOPEPQ8N6M6 819 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 NEK11Q8NG66 645 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 OR2I1PQ8NGU4 316 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 CFAP57Q96MR6 1250 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 SIK2Q9H0K1 926 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 MIR1-1HGQ9H1L0 117 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 EIF2B4Q9UI10 523 aaKnown RBP21.56■■□□□ 1.04
SREBF1-210ENST00000471445 TBC1D30Q9Y2I9 924 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-210ENST00000471445 OR51B4Q9Y5P0 310 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 PCNX2A6NKB5 2137 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 CHD5Q8TDI0 1954 aa21.56■■□□□ 1.04
SREBF1-210ENST00000471445 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-210ENST00000471445 BCAT2O15382 392 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-210ENST00000471445 OPHN1O60890 802 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 RNASEH1O60930 286 aaKnown RBP21.55■■□□□ 1.04
SREBF1-210ENST00000471445 CNTN5O94779 1100 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 UNGP13051 313 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-210ENST00000471445 RDXP35241 583 aaKnown RBP21.55■■□□□ 1.04
SREBF1-210ENST00000471445 GSCP56915 257 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-210ENST00000471445 UBXN1Q04323 297 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 ZNF252P-AS1Q0IIN9 211 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 ZNF177Q13360 481 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-210ENST00000471445 ALFQ53S48 1182 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 PIP4P1Q86T03 277 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 HDDC3Q8N4P3 179 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 DEFB124Q8NES8 71 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 FRS2Q8WU20 508 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 PCMTD1Q96MG8 357 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-210ENST00000471445 PPP1R9BQ96SB3 815 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 C11orf70Q9BRQ4 267 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 FEM1AQ9BSK4 669 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 ZDHHC5Q9C0B5 715 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 TMPRSS4Q9NRS4 437 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 SERGEFQ9UGK8 458 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 SNX10Q9Y5X0 201 aa21.55■■□□□ 1.04
SREBF1-210ENST00000471445 MID1O15344 667 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 ATP1A3P13637 1013 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 NNMTP40261 264 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 ELAVL3Q14576 367 aaKnown RBP21.54■■□□□ 1.04
SREBF1-210ENST00000471445 ARTNQ5T4W7 220 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 ACBD5Q5T8D3 534 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-210ENST00000471445 MMAAQ8IVH4 418 aaKnown RBP21.54■■□□□ 1.04
SREBF1-210ENST00000471445 STK40Q8N2I9 435 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 EMC1Q8N766 993 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 SNX19Q92543 992 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 PCDHB18PQ96TA0 734 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 FAM129BQ96TA1 746 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 FBXL12Q9NXK8 326 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 SLC25A13Q9UJS0 675 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 NCKAP1Q9Y2A7 1128 aa21.54■■□□□ 1.04
SREBF1-210ENST00000471445 SLCO1B1Q9Y6L6 691 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms