RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 RC3H2Q9HBD1 1191 aaKnown RBP5.71□□□□□ -1.49
RFC3-202ENST00000434425 RAPGEFL1Q9UHV5 662 aa5.71□□□□□ -1.49
RFC3-202ENST00000434425 DBNLQ9UJU6 430 aaKnown RBP5.71□□□□□ -1.49
RFC3-202ENST00000434425 SATB2Q9UPW6 733 aa5.71□□□□□ -1.49
RFC3-202ENST00000434425 DERAQ9Y315 318 aa5.71□□□□□ -1.49
RFC3-202ENST00000434425 MRFAP1Q9Y605 127 aa5.71□□□□□ -1.49
RFC3-202ENST00000434425 FOCADQ5VW36 1801 aa5.71□□□□□ -1.49
RFC3-202ENST00000434425 ZNF536O15090 1300 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 LRRD1A4D1F6 860 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 FAM181BA6NEQ2 426 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 SLC15A5A6NIM6 579 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 PER2O15055 1255 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 B3GALT2O43825 422 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 GPRIN2O60269 458 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 EXOC3O60645 756 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 GGPS1O95749 300 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 BAG3O95817 575 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 AFPP02771 609 aaKnown RBP5.71□□□□□ -1.5
RFC3-202ENST00000434425 HOXC6P09630 235 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 ACADMP11310 421 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 FGFR1P11362 822 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 FOSL2P15408 326 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 TSHRP16473 764 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 NFKBIAP25963 317 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 PTBP1P26599 531 aaKnown RBP eCLIP5.71□□□□□ -1.59e-8■■■■■ 31
RFC3-202ENST00000434425 ALDH4A1P30038 563 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 MLH1P40692 756 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 CETN2P41208 172 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 HTR2BP41595 481 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 HSPA7P48741 367 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 ALDH9A1P49189 494 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 ZNF165P49910 485 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 DNM2P50570 870 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 CCR5P51681 352 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 LUMP51884 338 aaPredicted RBP5.71□□□□□ -1.5
RFC3-202ENST00000434425 EPHB4P54760 987 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 VBP1P61758 197 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 DYNLL1P63167 89 aaKnown RBP5.71□□□□□ -1.5
RFC3-202ENST00000434425 CBX1P83916 185 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 SMAD3P84022 425 aaKnown RBP5.71□□□□□ -1.5
RFC3-202ENST00000434425 LRMPQ12912 555 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 PLD1Q13393 1074 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 ITGA7Q13683 1181 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 GRB14Q14449 540 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 NCAPHQ15003 741 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 MOGQ16653 247 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 HIF1AQ16665 826 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 PFKFB4Q16877 469 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 MPEG1Q2M385 716 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 TYSND1Q2T9J0 566 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 TRIM60Q495X7 471 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 MCMDC2Q4G0Z9 681 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 XP32Q5T750 250 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 LIN9Q5TKA1 542 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 NEPROQ6NW34 567 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 PGM2L1Q6PCE3 622 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 TRIM72Q6ZMU5 477 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 CACNA2D4Q7Z3S7 1137 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 SZRD1Q7Z422 152 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 KSR1Q8IVT5 923 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 HERC6Q8IVU3 1022 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 SCUBE1Q8IWY4 988 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 FAM217AQ8IXS0 508 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 KBTBD3Q8NAB2 608 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 ACER1Q8TDN7 264 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 TSPEARQ8WU66 669 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 GATAD2BQ8WXI9 593 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 ST8SIA4Q92187 359 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 GTF3C6Q969F1 213 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 NLRP4Q96MN2 994 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 CDC6Q99741 560 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 PRRX2Q99811 253 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 TSG101Q99816 390 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 CCT7Q99832 543 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 C19orf43Q9BQ61 176 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 HAUS8Q9BT25 410 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 DSCC1Q9BVC3 393 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 NUP85Q9BW27 656 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 OXCT2Q9BYC2 517 aaPredicted RBP5.71□□□□□ -1.5
RFC3-202ENST00000434425 FAM129AQ9BZQ8 928 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 C17orf75Q9HAS0 396 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 ERVK-5Q9HDB9 667 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 SARS2Q9NP81 518 aaKnown RBP5.71□□□□□ -1.5
RFC3-202ENST00000434425 NUDT15Q9NV35 164 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 IL37Q9NZH6 218 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 WHRNQ9P202 907 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 IPO11Q9UI26 975 aaKnown RBP5.71□□□□□ -1.5
RFC3-202ENST00000434425 NAALAD2Q9Y3Q0 740 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
RFC3-202ENST00000434425 GPC6Q9Y625 555 aaPredicted RBP5.71□□□□□ -1.5
RFC3-202ENST00000434425 C15orf38-AP3S2A0A0A6YYH1 394 aa5.7□□□□□ -1.5
RFC3-202ENST00000434425 TRAV20A0A0B4J274 112 aa5.7□□□□□ -1.5
RFC3-202ENST00000434425 EME2A4GXA9 379 aaPredicted RBP5.7□□□□□ -1.5
RFC3-202ENST00000434425 RHPN2P1A8MT19 583 aa5.7□□□□□ -1.5
RFC3-202ENST00000434425 E7EVH7 732 aa5.7□□□□□ -1.5
RFC3-202ENST00000434425 H0YCG3 227 aa5.7□□□□□ -1.5
RFC3-202ENST00000434425 GTPBP1O00178 669 aaKnown RBP5.7□□□□□ -1.5
RFC3-202ENST00000434425 EREGO14944 169 aa5.7□□□□□ -1.5
RFC3-202ENST00000434425 ANGPT2O15123 496 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms