RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 GLMNQ92990 594 aa8.55□□□□□ -1.04
VPS36-201ENST00000378060 FAM120BQ96EK7 910 aaKnown RBP8.55□□□□□ -1.04
VPS36-201ENST00000378060 ZBTB45Q96K62 511 aaPredicted RBP8.55□□□□□ -1.04
VPS36-201ENST00000378060 PAIP1Q9H074 479 aaKnown RBP8.55□□□□□ -1.04
VPS36-201ENST00000378060 WDR41Q9HAD4 459 aa8.55□□□□□ -1.04
VPS36-201ENST00000378060 ABI2Q9NYB9 513 aaPredicted RBP8.55□□□□□ -1.04
VPS36-201ENST00000378060 PRKAG2Q9UGJ0 569 aa8.55□□□□□ -1.04
VPS36-201ENST00000378060 A0A1B0GW55 424 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 E5RJQ4 531 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 H3BRB1 525 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 AGPSO00116 658 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 KPNA4O00629 521 aaPredicted RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 GPR182O15218 404 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DDX3YO15523 660 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 CNOT3O75175 753 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 BAIAP3O94812 1187 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 VAPBO95292 243 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 CELF2O95319 508 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 IFNA14P01570 189 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 SERPINF2P08697 491 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DUX4L2P0CJ85 424 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DUX4L3P0CJ86 424 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DUX4L4P0CJ87 422 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DUX4L5P0CJ88 424 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DUX4L6P0CJ89 424 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DUX4L7P0CJ90 424 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ITGALP20701 1170 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 GLRA2P23416 452 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 NR1H2P55055 460 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 CDH8P55286 799 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 BNIP1Q12981 228 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 QPCTQ16769 361 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 OTOAQ7RTW8 1153 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 CLVS1Q8IUQ0 354 aaPredicted RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 PSTKQ8IV42 348 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 CCDC103Q8IW40 242 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 MIER2Q8N344 545 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 SVOPQ8N4V2 548 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 LRRC57Q8N9N7 239 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DIS3LQ8TF46 1054 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 PYDC1Q8WXC3 89 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 TADA1Q96BN2 335 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 HSFY1Q96LI6 401 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 EBNA1BP2Q99848 306 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 BBS2Q9BXC9 721 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 UGT2B28Q9BY64 529 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 TUT1Q9H6E5 874 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ENTPD7Q9NQZ7 604 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 C6orf203Q9P0P8 240 aaPredicted RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 DUX4Q9UBX2 424 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 PPP2R3BQ9Y5P8 575 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 C17orf102A2RUQ5 167 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 RGSL1A5PLK6 1076 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 MEI4A8MW99 385 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 KCNK1O00180 336 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 KRT36O76013 467 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 NOL4O94818 638 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 GJB6O95452 261 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 KRT6AP02538 564 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 KRT6BP04259 564 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 INSRRP14616 1297 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ANPEPP15144 967 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 GSTT1P30711 240 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 CYP2C18P33260 490 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 OR1G1P47890 313 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ALDH1A3P47895 512 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 KRT6CP48668 564 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 KPNA1P52294 538 aaPredicted RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 CSE1LP55060 971 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 NCKAP1LP55160 1127 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ST8SIA6P61647 398 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 HTRA3P83110 453 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 NR6A1Q15406 480 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 TAF1CQ15572 869 aaPredicted RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 CST9Q5W186 159 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 SLC27A1Q6PCB7 646 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 SCUBE3Q8IX30 993 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DEFB106AQ8N104 65 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 REPS2Q8NFH8 660 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 KLRG1Q96E93 195 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 SYT15Q9BQS2 421 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ZBED2Q9BTP6 218 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ADGRE3Q9BY15 652 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 TRPC7Q9HCX4 862 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 DMAP1Q9NPF5 467 aaPredicted RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 ACP6Q9NPH0 428 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 TAS2R13Q9NYV9 303 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 SPASTQ9UBP0 616 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 PRPF19Q9UMS4 504 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 DOCK1Q14185 1865 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 A0A087X1B8 175 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 TMEM114B3SHH9 223 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS36-201ENST00000378060 HDAC3O15379 428 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 MAP3K13O43283 966 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ETS1P14921 441 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 AXLP30530 894 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 NOS2P35228 1153 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms