RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 MYRFQ9Y2G1 1151 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 MYLKQ15746 1914 aa11.94□□□□□ -0.5
SMARCA1-201ENST00000371121 ZNF701M0R085 212 aaPredicted RBP11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 CLIC3O95833 236 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 HDCP19113 662 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 CYP3A5P20815 502 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 PSMD8P48556 350 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 IFITM3Q01628 133 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 DLG2Q15700 870 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 TMEM26Q6ZUK4 368 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 TRIML2Q8N7C3 387 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 FAM47BQ8NA70 645 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 WDR41Q9HAD4 459 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 SUN2Q9UH99 717 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 MFHAS1Q9Y4C4 1052 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 STAMBPO95630 424 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 KRT7P08729 469 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 MYL6P60660 151 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 OLIG2Q13516 323 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 RAB39AQ14964 217 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 ACAP2Q15057 778 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 MCUQ8NE86 351 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 TWNKQ96RR1 684 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 XYLT2Q9H1B5 865 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 ZBTB26Q9HCK0 441 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 PRORSD1PA6NEY8 169 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 OCM2P0CE71 109 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 OCMP0CE72 109 aaPredicted RBP11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 MATN1P21941 496 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 ETFBP38117 255 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 HSPA2P54652 639 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 CHSY3Q70JA7 882 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 SETD3Q86TU7 594 aaPredicted RBP11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 HACE1Q8IYU2 909 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 ISL2Q96A47 359 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 SACM1LQ9NTJ5 587 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 ZDHHC2Q9UIJ5 367 aa11.93□□□□□ -0.5
SMARCA1-201ENST00000371121 NOP56O00567 594 aaKnown RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 VAPBO95292 243 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ZFXP17010 805 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 HSPA13P48723 471 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 NUP107P57740 925 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 MTMR1Q13613 665 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ATP1A4Q13733 1029 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 C8orf82Q6P1X6 216 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 CYS1Q717R9 158 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 CHST15Q7LFX5 561 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 SLC4A11Q8NBS3 891 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 DEPDC1BQ8WUY9 529 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 RMND5BQ96G75 393 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 FEM1CQ96JP0 617 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 RNF157Q96PX1 679 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 NOL11Q9H8H0 719 aaKnown RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 TCF7L2Q9NQB0 619 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 PNPLA3Q9NST1 481 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 GPATCH2LQ9NWQ4 482 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 TCRBV3S1A0A5B6 114 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 E7ENX8 843 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 F5H423 210 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 NEMP1O14524 444 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 GLRA3O75311 464 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 GTF2A2P52657 109 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 RWDD4Q6NW29 188 aaKnown RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ARL10Q8N8L6 244 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 HM13Q8TCT9 377 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 EME1Q96AY2 570 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 FCRL3Q96P31 734 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 CGRRF1Q99675 332 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 OSBPL11Q9BXB4 747 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 CLK4Q9HAZ1 481 aaKnown RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 AGO2Q9UKV8 859 aaKnown RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 TMED5Q9Y3A6 229 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 H0Y858 1186 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ENO3P13929 434 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ZNF182P17025 639 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 TFE3P19532 575 aaPredicted RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ME2P23368 584 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 GRK2P25098 689 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 RAP1GAPP47736 663 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 METTL21CQ5VZV1 264 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 FAM117BQ6P1L5 589 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ZC3H7AQ8IWR0 971 aaKnown RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 CATSPER1Q8NEC5 780 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ASB9Q96DX5 294 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 AGAP3Q96P47 875 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 TNFRSF12AQ9NP84 129 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 TLR9Q9NR96 1032 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 VPS45Q9NRW7 570 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 ANKEF1Q9NU02 776 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 PAK5Q9P286 719 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 CD300AQ9UGN4 299 aa11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 COPG1Q9Y678 874 aaKnown RBP11.92□□□□□ -0.5
SMARCA1-201ENST00000371121 BCLAF3A2AJT9 711 aaKnown RBP11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 KRBA1A5PL33 1030 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 WDR64B1ANS9 1081 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 CFLARO15519 480 aa11.91□□□□□ -0.5
SMARCA1-201ENST00000371121 RGS20O76081 388 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms