RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 MINK1Q8N4C8 1332 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-209ENST00000635750 CETN2P41208 172 aa6.6□□□□□ -1.35
SCN1A-209ENST00000635750 AXDND1Q5T1B0 1012 aaPredicted RBP6.6□□□□□ -1.35
SCN1A-209ENST00000635750 DHX8Q14562 1220 aaKnown RBP6.6□□□□□ -1.35
SCN1A-209ENST00000635750 FAM161AQ3B820 660 aa6.6□□□□□ -1.35
SCN1A-209ENST00000635750 CLASRPQ8N2M8 674 aaKnown RBP6.6□□□□□ -1.35
SCN1A-209ENST00000635750 ZNF396Q96N95 335 aaPredicted RBP6.6□□□□□ -1.35
SCN1A-209ENST00000635750 RBM42Q9BTD8 480 aaKnown RBP6.6□□□□□ -1.35
SCN1A-209ENST00000635750 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
SCN1A-209ENST00000635750 WDR70Q9NW82 654 aa6.6□□□□□ -1.35
SCN1A-209ENST00000635750 UBTFL1P0CB47 393 aaPredicted RBP6.6□□□□□ -1.35
SCN1A-209ENST00000635750 PPM1EQ8WY54 764 aa6.6□□□□□ -1.35
SCN1A-209ENST00000635750 RBM19Q9Y4C8 960 aaKnown RBP6.6□□□□□ -1.35
SCN1A-209ENST00000635750 JMYQ8N9B5 988 aa6.6□□□□□ -1.35
SCN1A-209ENST00000635750 SCLT1Q96NL6 688 aa6.6□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC150Q8NCX0 1101 aa6.6□□□□□ -1.35
SCN1A-209ENST00000635750 PABPN1LA6NDY0 278 aaKnown RBP6.59□□□□□ -1.35
SCN1A-209ENST00000635750 LEKR1Q6ZMV7 388 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 TRIM22Q8IYM9 498 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 SMC2O95347 1197 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 RIPK4P57078 832 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 EPB41L2O43491 1005 aaKnown RBP6.59□□□□□ -1.35
SCN1A-209ENST00000635750 IQCEQ6IPM2 695 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC69A6NI79 296 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 JAKMIP3Q5VZ66 844 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-209ENST00000635750 KIAA0754O94854 1291 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 BCL2L13Q9BXK5 485 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 MYBBP1AQ9BQG0 1328 aaKnown RBP6.59□□□□□ -1.35
SCN1A-209ENST00000635750 KDM4AO75164 1064 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 PDCP20941 246 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 TTLL12Q14166 644 aaPredicted RBP6.59□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC57Q2TAC2 916 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 FSD1Q9BTV5 496 aa6.59□□□□□ -1.35
SCN1A-209ENST00000635750 SSR1P43307 286 aaKnown RBP6.59□□□□□ -1.36
SCN1A-209ENST00000635750 CYB5RLQ6IPT4 315 aa6.59□□□□□ -1.36
SCN1A-209ENST00000635750 ZSCAN25Q6NSZ9 544 aa6.59□□□□□ -1.36
SCN1A-209ENST00000635750 PPP1R12BO60237 982 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-209ENST00000635750 STRN4Q9NRL3 753 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 GNAI1P63096 354 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 TAX1BP1Q86VP1 789 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 MPHOSPH8Q99549 860 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 MYCNP04198 464 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-209ENST00000635750 PPFIBP1Q86W92 1011 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 CCDC30Q5VVM6 783 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 ZNF287Q9HBT7 754 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 NOL7Q9UMY1 257 aaKnown RBP6.58□□□□□ -1.36
SCN1A-209ENST00000635750 NUTM2BA6NNL0 878 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-209ENST00000635750 NUTM2EB1AL46 878 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-209ENST00000635750 ATP2B1P20020 1258 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 NUTM2AQ8IVF1 878 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-209ENST00000635750 SOGA1O94964 1423 aa6.58□□□□□ -1.36
SCN1A-209ENST00000635750 BAZ1AQ9NRL2 1556 aaPredicted RBP6.58□□□□□ -1.36
SCN1A-209ENST00000635750 PLEKHO1Q53GL0 409 aaPredicted RBP6.57□□□□□ -1.36
SCN1A-209ENST00000635750 GIGYF2Q6Y7W6 1299 aaKnown RBP6.57□□□□□ -1.36
SCN1A-209ENST00000635750 COMMD10Q9Y6G5 202 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 CHMP4BP1P59074 171 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 DNAJC2Q99543 621 aaKnown RBP6.57□□□□□ -1.36
SCN1A-209ENST00000635750 PANK3Q9H999 370 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 NF2P35240 595 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 SLC26A8Q96RN1 970 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 DDX23Q9BUQ8 820 aaKnown RBP6.57□□□□□ -1.36
SCN1A-209ENST00000635750 SSX2IPQ9Y2D8 614 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 DZIP1LQ8IYY4 767 aaKnown RBP6.57□□□□□ -1.36
SCN1A-209ENST00000635750 MAP3K9P80192 1104 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 ZNF710Q8N1W2 664 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 ABTB2Q8N961 1025 aa6.57□□□□□ -1.36
SCN1A-209ENST00000635750 TATP17735 454 aaPredicted RBP6.56□□□□□ -1.36
SCN1A-209ENST00000635750 HSP90AB3PQ58FF7 597 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 DHX57Q6P158 1386 aaKnown RBP6.56□□□□□ -1.36
SCN1A-209ENST00000635750 CABP4P57796 275 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 TRIM5Q9C035 493 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 CENPHQ9H3R5 247 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 CCDC39Q9UFE4 941 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 ANKRD18BA2A2Z9 1011 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 DYDC1Q8WWB3 177 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 SERPINC1P01008 464 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 ZNF397Q8NF99 534 aaPredicted RBP6.56□□□□□ -1.36
SCN1A-209ENST00000635750 MPHOSPH6Q99547 160 aaKnown RBP6.56□□□□□ -1.36
SCN1A-209ENST00000635750 FAM13BQ9NYF5 915 aa6.56□□□□□ -1.36
SCN1A-209ENST00000635750 ANKRD1Q15327 319 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 STK11IPQ8N1F8 1099 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 CDKL5O76039 1030 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 STK38Q15208 465 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 GAS2L2Q8NHY3 880 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 CEP63Q96MT8 703 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 EIF3JO75822 258 aaKnown RBP6.55□□□□□ -1.36
SCN1A-209ENST00000635750 EHMT1Q9H9B1 1298 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 CA8P35219 290 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 ESCO1Q5FWF5 840 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 FERMT2Q96AC1 680 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 SSBP05455 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCN1A-209ENST00000635750 FERMT1Q9BQL6 677 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 SEC63Q9UGP8 760 aaKnown RBP6.55□□□□□ -1.36
SCN1A-209ENST00000635750 CCDC66A2RUB6 948 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 PIP4K2BP78356 416 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 TOM1L2Q6ZVM7 507 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 RUNDC1Q96C34 613 aa6.55□□□□□ -1.36
SCN1A-209ENST00000635750 GNAI3P08754 354 aa6.54□□□□□ -1.36
SCN1A-209ENST00000635750 MCM2P49736 904 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms