RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
CDH23-214ENST00000622827 MPNDQ8N594 471 aa17.15■□□□□ 0.34
CDH23-214ENST00000622827 DDX11Q96FC9 970 aa17.15■□□□□ 0.34
CDH23-214ENST00000622827 TEFQ10587 303 aa17.15■□□□□ 0.34
CDH23-214ENST00000622827 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
CDH23-214ENST00000622827 SYCP1Q15431 976 aa17.15■□□□□ 0.34
CDH23-214ENST00000622827 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
CDH23-214ENST00000622827 DDX58O95786 925 aaKnown RBP17.15■□□□□ 0.34
CDH23-214ENST00000622827 FKBP5Q13451 457 aaPredicted RBP17.15■□□□□ 0.34
CDH23-214ENST00000622827 STIM1Q13586 685 aa17.15■□□□□ 0.34
CDH23-214ENST00000622827 RIPK4P57078 832 aa17.14■□□□□ 0.33
CDH23-214ENST00000622827 AEBP1Q8IUX7 1158 aa17.14■□□□□ 0.33
CDH23-214ENST00000622827 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
CDH23-214ENST00000622827 STK38Q15208 465 aa17.14■□□□□ 0.33
CDH23-214ENST00000622827 CEBPZQ03701 1054 aaKnown RBP17.13■□□□□ 0.33
CDH23-214ENST00000622827 NEK4P51957 841 aa17.13■□□□□ 0.33
CDH23-214ENST00000622827 LRRFIP2Q9Y608 721 aaKnown RBP17.13■□□□□ 0.33
CDH23-214ENST00000622827 SART3Q15020 963 aaKnown RBP17.13■□□□□ 0.33
CDH23-214ENST00000622827 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
CDH23-214ENST00000622827 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
CDH23-214ENST00000622827 CUX1P39880 1505 aa17.12■□□□□ 0.33
CDH23-214ENST00000622827 RUNDC1Q96C34 613 aa17.12■□□□□ 0.33
CDH23-214ENST00000622827 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
CDH23-214ENST00000622827 CALCOCO1Q9P1Z2 691 aa17.12■□□□□ 0.33
CDH23-214ENST00000622827 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
CDH23-214ENST00000622827 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
CDH23-214ENST00000622827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDH23-214ENST00000622827 SHTN1A0MZ66 631 aa17.1■□□□□ 0.33
CDH23-214ENST00000622827 ME1P48163 572 aa17.1■□□□□ 0.33
CDH23-214ENST00000622827 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
CDH23-214ENST00000622827 TMCO3Q6UWJ1 677 aa17.1■□□□□ 0.33
CDH23-214ENST00000622827 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
CDH23-214ENST00000622827 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
CDH23-214ENST00000622827 CCAR1Q8IX12 1150 aaKnown RBP17.09■□□□□ 0.33
CDH23-214ENST00000622827 WASHC4Q2M389 1173 aa17.09■□□□□ 0.33
CDH23-214ENST00000622827 DACH1Q9UI36 760 aa17.09■□□□□ 0.33
CDH23-214ENST00000622827 EID1Q9Y6B2 187 aa17.09■□□□□ 0.33
CDH23-214ENST00000622827 KIF2AO00139 706 aaPredicted RBP17.09■□□□□ 0.33
CDH23-214ENST00000622827 MAP9Q49MG5 647 aa17.09■□□□□ 0.33
CDH23-214ENST00000622827 CGNQ9P2M7 1197 aaKnown RBP17.09■□□□□ 0.33
CDH23-214ENST00000622827 KDM4AO75164 1064 aa17.08■□□□□ 0.33
CDH23-214ENST00000622827 AKNAQ7Z591 1439 aa17.08■□□□□ 0.33
CDH23-214ENST00000622827 HIP1O00291 1037 aa17.08■□□□□ 0.32
CDH23-214ENST00000622827 GOLGA6L10A0A0M3HER8 536 aa17.08■□□□□ 0.32
CDH23-214ENST00000622827 FYB1O15117 783 aa17.08■□□□□ 0.32
CDH23-214ENST00000622827 ZSCAN30Q86W11 494 aa17.08■□□□□ 0.32
CDH23-214ENST00000622827 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.32
CDH23-214ENST00000622827 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
CDH23-214ENST00000622827 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
CDH23-214ENST00000622827 UBXN4Q92575 508 aa17.07■□□□□ 0.32
CDH23-214ENST00000622827 CRACR2AQ9BSW2 395 aa17.07■□□□□ 0.32
CDH23-214ENST00000622827 FAM107BQ9H098 131 aa17.07■□□□□ 0.32
CDH23-214ENST00000622827 GPATCH11Q8N954 259 aa17.07■□□□□ 0.32
CDH23-214ENST00000622827 BRD4O60885 1362 aaPredicted RBP17.07■□□□□ 0.32
CDH23-214ENST00000622827 FHOD3Q2V2M9 1422 aa17.07■□□□□ 0.32
CDH23-214ENST00000622827 KRT18P05783 430 aaKnown RBP17.07■□□□□ 0.32
CDH23-214ENST00000622827 ATP2B1P20020 1258 aa17.06■□□□□ 0.32
CDH23-214ENST00000622827 KIAA1328Q86T90 577 aa17.06■□□□□ 0.32
CDH23-214ENST00000622827 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
CDH23-214ENST00000622827 CCDC91Q7Z6B0 441 aa17.06■□□□□ 0.32
CDH23-214ENST00000622827 KRT85P78386 507 aa17.06■□□□□ 0.32
CDH23-214ENST00000622827 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
CDH23-214ENST00000622827 K7ELQ4 463 aaPredicted RBP17.05■□□□□ 0.32
CDH23-214ENST00000622827 SMARCA2P51531 1590 aa17.05■□□□□ 0.32
CDH23-214ENST00000622827 CBX1P83916 185 aa17.05■□□□□ 0.32
CDH23-214ENST00000622827 GNAI1P63096 354 aa17.05■□□□□ 0.32
CDH23-214ENST00000622827 CCDC148Q8NFR7 591 aa17.04■□□□□ 0.32
CDH23-214ENST00000622827 NUTM2FA1L443 756 aa17.04■□□□□ 0.32
CDH23-214ENST00000622827 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
CDH23-214ENST00000622827 CCDC7Q96M83 1385 aa17.04■□□□□ 0.32
CDH23-214ENST00000622827 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
CDH23-214ENST00000622827 TSPYL4Q9UJ04 414 aa17.04■□□□□ 0.32
CDH23-214ENST00000622827 RBM25P49756 843 aaKnown RBP17.04■□□□□ 0.32
CDH23-214ENST00000622827 ZHX1Q9UKY1 873 aaPredicted RBP17.04■□□□□ 0.32
CDH23-214ENST00000622827 NF2P35240 595 aa17.03■□□□□ 0.32
CDH23-214ENST00000622827 ANKRD1Q15327 319 aa17.03■□□□□ 0.32
CDH23-214ENST00000622827 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
CDH23-214ENST00000622827 IPO4Q8TEX9 1081 aaKnown RBP17.03■□□□□ 0.32
CDH23-214ENST00000622827 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
CDH23-214ENST00000622827 PAF1Q8N7H5 531 aa17.03■□□□□ 0.32
CDH23-214ENST00000622827 EPB41L2O43491 1005 aaKnown RBP17.03■□□□□ 0.32
CDH23-214ENST00000622827 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
CDH23-214ENST00000622827 IBSPP21815 317 aaPredicted RBP17.02■□□□□ 0.32
CDH23-214ENST00000622827 MYO10Q9HD67 2058 aa17.02■□□□□ 0.32
CDH23-214ENST00000622827 ARHGAP29Q52LW3 1261 aa17.02■□□□□ 0.32
CDH23-214ENST00000622827 MIA2Q96PC5 1412 aa17.02■□□□□ 0.32
CDH23-214ENST00000622827 SYCE3A1L190 88 aa17.02■□□□□ 0.31
CDH23-214ENST00000622827 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.31
CDH23-214ENST00000622827 MCM3P25205 808 aa17.02■□□□□ 0.31
CDH23-214ENST00000622827 GBP3Q9H0R5 595 aa17.02■□□□□ 0.31
CDH23-214ENST00000622827 KIF18AQ8NI77 898 aa17.01■□□□□ 0.31
CDH23-214ENST00000622827 CFAP45Q9UL16 551 aa17.01■□□□□ 0.31
CDH23-214ENST00000622827 KIF3BO15066 747 aa17.01■□□□□ 0.31
CDH23-214ENST00000622827 CEP63Q96MT8 703 aa17.01■□□□□ 0.31
CDH23-214ENST00000622827 CYP46A1Q9Y6A2 500 aa17.01■□□□□ 0.31
CDH23-214ENST00000622827 MAP2K1Q02750 393 aaPredicted RBP17.01■□□□□ 0.31
CDH23-214ENST00000622827 CIZ1Q9ULV3 898 aaPredicted RBP17.01■□□□□ 0.31
CDH23-214ENST00000622827 SEPT11Q9NVA2 429 aaKnown RBP17■□□□□ 0.31
CDH23-214ENST00000622827 EFCAB2Q5VUJ9 269 aa17■□□□□ 0.31
CDH23-214ENST00000622827 MTMR7Q9Y216 660 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms