RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 LIMD1Q9UGP4 676 aa10.91□□□□□ -0.66
CSDE1-210ENST00000525878 TRIM47Q96LD4 638 aa10.9□□□□□ -0.66
CSDE1-210ENST00000525878 LILRB3O75022 631 aa10.88□□□□□ -0.67
CSDE1-210ENST00000525878 SNRPBP14678 240 aaKnown RBP10.88□□□□□ -0.67
CSDE1-210ENST00000525878 VARSP26640 1264 aaKnown RBP10.88□□□□□ -0.67
CSDE1-210ENST00000525878 SENP2Q9HC62 589 aa10.88□□□□□ -0.67
CSDE1-210ENST00000525878 QPCTQ16769 361 aa10.87□□□□□ -0.67
CSDE1-210ENST00000525878 WASF2Q9Y6W5 498 aa10.87□□□□□ -0.67
CSDE1-210ENST00000525878 CTHP32929 405 aa10.86□□□□□ -0.67
CSDE1-210ENST00000525878 MAP10Q9P2G4 905 aa10.86□□□□□ -0.67
CSDE1-210ENST00000525878 TLL2Q9Y6L7 1015 aa10.86□□□□□ -0.67
CSDE1-210ENST00000525878 PER1O15534 1290 aaPredicted RBP10.85□□□□□ -0.67
CSDE1-210ENST00000525878 CSPP1Q1MSJ5 1256 aa10.85□□□□□ -0.67
CSDE1-210ENST00000525878 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
CSDE1-210ENST00000525878 KIFC2Q96AC6 838 aa10.84□□□□□ -0.67
CSDE1-210ENST00000525878 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
CSDE1-210ENST00000525878 TRIM46Q7Z4K8 759 aa10.83□□□□□ -0.68
CSDE1-210ENST00000525878 CAPN5O15484 640 aaPredicted RBP10.82□□□□□ -0.68
CSDE1-210ENST00000525878 WFS1O76024 890 aa10.81□□□□□ -0.68
CSDE1-210ENST00000525878 CLK2P49760 499 aaKnown RBP10.81□□□□□ -0.68
CSDE1-210ENST00000525878 RTL5Q5HYW3 569 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-210ENST00000525878 FOXJ1Q92949 421 aa10.81□□□□□ -0.68
CSDE1-210ENST00000525878 CDK15Q96Q40 435 aa10.81□□□□□ -0.68
CSDE1-210ENST00000525878 NUTM2BA6NNL0 878 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-210ENST00000525878 NUTM2EB1AL46 878 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-210ENST00000525878 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-210ENST00000525878 NUTM2AQ8IVF1 878 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-210ENST00000525878 RSPH6AQ9H0K4 717 aa10.8□□□□□ -0.68
CSDE1-210ENST00000525878 BMP1P13497 986 aa10.79□□□□□ -0.68
CSDE1-210ENST00000525878 NNTQ13423 1086 aa10.79□□□□□ -0.68
CSDE1-210ENST00000525878 C4orf48Q5BLP8 95 aa10.79□□□□□ -0.68
CSDE1-210ENST00000525878 FAM174AQ8TBP5 190 aa10.79□□□□□ -0.68
CSDE1-210ENST00000525878 KLF16Q9BXK1 252 aaPredicted RBP10.78□□□□□ -0.68
CSDE1-210ENST00000525878 TERTO14746 1132 aaKnown RBP10.77□□□□□ -0.69
CSDE1-210ENST00000525878 ADH1CP00326 375 aa10.77□□□□□ -0.69
CSDE1-210ENST00000525878 LCE2CQ5TA81 110 aa10.77□□□□□ -0.69
CSDE1-210ENST00000525878 TSC1Q92574 1164 aa10.76□□□□□ -0.69
CSDE1-210ENST00000525878 POLR3EQ9NVU0 708 aa10.76□□□□□ -0.69
CSDE1-210ENST00000525878 TIMP2P16035 220 aa10.75□□□□□ -0.69
CSDE1-210ENST00000525878 SH3RF1Q7Z6J0 888 aa10.75□□□□□ -0.69
CSDE1-210ENST00000525878 BPHLQ86WA6 291 aaPredicted RBP10.75□□□□□ -0.69
CSDE1-210ENST00000525878 ARMC2Q8NEN0 867 aa10.75□□□□□ -0.69
CSDE1-210ENST00000525878 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
CSDE1-210ENST00000525878 WIPF1O43516 503 aa10.74□□□□□ -0.69
CSDE1-210ENST00000525878 C1QTNF2Q9BXJ5 285 aa10.74□□□□□ -0.69
CSDE1-210ENST00000525878 GRM5P41594 1212 aa10.73□□□□□ -0.69
CSDE1-210ENST00000525878 WDR4P57081 412 aaKnown RBP10.72□□□□□ -0.69
CSDE1-210ENST00000525878 SH3BP5LQ7L8J4 393 aa10.72□□□□□ -0.69
CSDE1-210ENST00000525878 NR5A1Q13285 461 aa10.71□□□□□ -0.69
CSDE1-210ENST00000525878 SKIV2LQ15477 1246 aaKnown RBP10.71□□□□□ -0.69
CSDE1-210ENST00000525878 FBXO31Q5XUX0 539 aaPredicted RBP10.71□□□□□ -0.69
CSDE1-210ENST00000525878 ZFP42Q96MM3 310 aa10.71□□□□□ -0.69
CSDE1-210ENST00000525878 KDM4CQ9H3R0 1056 aa10.71□□□□□ -0.69
CSDE1-210ENST00000525878 NR3C2P08235 984 aa10.7□□□□□ -0.7
CSDE1-210ENST00000525878 CTDSPL2Q05D32 466 aa10.7□□□□□ -0.7
CSDE1-210ENST00000525878 AGERQ15109 404 aa10.7□□□□□ -0.7
CSDE1-210ENST00000525878 SH3D19Q5HYK7 790 aa10.7□□□□□ -0.7
CSDE1-210ENST00000525878 NBPF14Q5TI25 921 aa10.7□□□□□ -0.7
CSDE1-210ENST00000525878 MRPL14Q6P1L8 145 aaKnown RBP10.7□□□□□ -0.7
CSDE1-210ENST00000525878 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.7□□□□□ -0.7
CSDE1-210ENST00000525878 GPBP1L1Q9HC44 474 aaPredicted RBP10.7□□□□□ -0.7
CSDE1-210ENST00000525878 ARID5BQ14865 1188 aa10.69□□□□□ -0.7
CSDE1-210ENST00000525878 TRMT44Q8IYL2 757 aaKnown RBP10.69□□□□□ -0.7
CSDE1-210ENST00000525878 BCANQ96GW7 911 aa10.69□□□□□ -0.7
CSDE1-210ENST00000525878 FAM117AQ9C073 453 aa10.69□□□□□ -0.7
CSDE1-210ENST00000525878 NXF1Q9UBU9 619 aaKnown RBP10.69□□□□□ -0.7
CSDE1-210ENST00000525878 MAP4K5Q9Y4K4 846 aa10.69□□□□□ -0.7
CSDE1-210ENST00000525878 PPP2R2DQ66LE6 453 aa10.68□□□□□ -0.7
CSDE1-210ENST00000525878 GPKOWQ92917 476 aaPredicted RBP eCLIP10.68□□□□□ -0.7
CSDE1-210ENST00000525878 NPAS3Q8IXF0 933 aa10.67□□□□□ -0.7
CSDE1-210ENST00000525878 DDRGK1Q96HY6 314 aa10.67□□□□□ -0.7
CSDE1-210ENST00000525878 ITPKCQ96DU7 683 aa10.66□□□□□ -0.7
CSDE1-210ENST00000525878 ZFAND3Q9H8U3 227 aa10.66□□□□□ -0.7
CSDE1-210ENST00000525878 ZIC2O95409 532 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-210ENST00000525878 PROCA1Q8NCQ7 364 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-210ENST00000525878 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
CSDE1-210ENST00000525878 SCARF1Q14162 830 aa10.63□□□□□ -0.71
CSDE1-210ENST00000525878 LRRN4Q8WUT4 740 aa10.63□□□□□ -0.71
CSDE1-210ENST00000525878 PDXDC2PQ6P474 469 aa10.62□□□□□ -0.71
CSDE1-210ENST00000525878 MAGEB6P1A0A0J9YX57 407 aa10.61□□□□□ -0.71
CSDE1-210ENST00000525878 H3BM21 787 aa10.61□□□□□ -0.71
CSDE1-210ENST00000525878 FSHRP23945 695 aa10.61□□□□□ -0.71
CSDE1-210ENST00000525878 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
CSDE1-210ENST00000525878 ERFEQ4G0M1 354 aa10.61□□□□□ -0.71
CSDE1-210ENST00000525878 SLC16A10Q8TF71 515 aa10.61□□□□□ -0.71
CSDE1-210ENST00000525878 FKBPLQ9UIM3 349 aa10.61□□□□□ -0.71
CSDE1-210ENST00000525878 VASH1Q7L8A9 365 aaPredicted RBP10.6□□□□□ -0.71
CSDE1-210ENST00000525878 MEIOBQ8N635 442 aa10.6□□□□□ -0.71
CSDE1-210ENST00000525878 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.71
CSDE1-210ENST00000525878 NR6A1Q15406 480 aa10.58□□□□□ -0.72
CSDE1-210ENST00000525878 CARD14Q9BXL6 1004 aa10.58□□□□□ -0.72
CSDE1-210ENST00000525878 STK17AQ9UEE5 414 aa10.58□□□□□ -0.72
CSDE1-210ENST00000525878 IRF7Q92985 503 aa10.57□□□□□ -0.72
CSDE1-210ENST00000525878 OCSTAMPQ9BR26 566 aa10.57□□□□□ -0.72
CSDE1-210ENST00000525878 EMILIN1Q9Y6C2 1016 aa10.57□□□□□ -0.72
CSDE1-210ENST00000525878 SOBPA7XYQ1 873 aa10.56□□□□□ -0.72
CSDE1-210ENST00000525878 VEGFBP49765 207 aa10.56□□□□□ -0.72
CSDE1-210ENST00000525878 CCDC116Q8IYX3 515 aa10.56□□□□□ -0.72
CSDE1-210ENST00000525878 LINC00528Q8N1L1 170 aa10.56□□□□□ -0.72
CSDE1-210ENST00000525878 ARHGAP9Q9BRR9 750 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms