RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 CAMKK2Q96RR4 588 aa21.98■■□□□ 1.11
PCM1-218ENST00000523055 COL14A1Q05707 1796 aaKnown RBP21.97■■□□□ 1.11
PCM1-218ENST00000523055 ALS2Q96Q42 1657 aa21.97■■□□□ 1.11
PCM1-218ENST00000523055 ANKARQ7Z5J8 1434 aa21.95■■□□□ 1.1
PCM1-218ENST00000523055 TRIM26Q12899 539 aaPredicted RBP21.94■■□□□ 1.1
PCM1-218ENST00000523055 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
PCM1-218ENST00000523055 PRAM1Q96QH2 718 aa21.94■■□□□ 1.1
PCM1-218ENST00000523055 CRYBG1Q9Y4K1 1723 aa21.94■■□□□ 1.1
PCM1-218ENST00000523055 ARHGEF28Q8N1W1 1705 aaKnown RBP21.91■■□□□ 1.1
PCM1-218ENST00000523055 ADGRB2O60241 1585 aa21.9■■□□□ 1.1
PCM1-218ENST00000523055 TRIM37O94972 964 aa21.9■■□□□ 1.1
PCM1-218ENST00000523055 PRR36Q9H6K5 1346 aa21.9■■□□□ 1.1
PCM1-218ENST00000523055 KIAA1210Q9ULL0 1709 aa21.9■■□□□ 1.1
PCM1-218ENST00000523055 DLC1Q96QB1 1528 aa21.9■■□□□ 1.1
PCM1-218ENST00000523055 YY1P25490 414 aa21.89■■□□□ 1.1
PCM1-218ENST00000523055 SIN3AQ96ST3 1273 aa21.89■■□□□ 1.1
PCM1-218ENST00000523055 SPATA31A1Q5TZJ5 1347 aa21.89■■□□□ 1.09
PCM1-218ENST00000523055 FAM196AQ6ZSG2 479 aa21.87■■□□□ 1.09
PCM1-218ENST00000523055 RREB1Q92766 1687 aa21.86■■□□□ 1.09
PCM1-218ENST00000523055 PARD3Q8TEW0 1356 aa21.86■■□□□ 1.09
PCM1-218ENST00000523055 APBA3O96018 575 aa21.85■■□□□ 1.09
PCM1-218ENST00000523055 GPRASP1Q5JY77 1395 aa21.85■■□□□ 1.09
PCM1-218ENST00000523055 NUP188Q5SRE5 1749 aa21.84■■□□□ 1.09
PCM1-218ENST00000523055 PRDM11Q9NQV5 511 aa21.84■■□□□ 1.09
PCM1-218ENST00000523055 TRAK1Q9UPV9 953 aa21.84■■□□□ 1.09
PCM1-218ENST00000523055 STAC3Q96MF2 364 aa21.83■■□□□ 1.09
PCM1-218ENST00000523055 HIRIP3Q9BW71 556 aaPredicted RBP21.83■■□□□ 1.09
PCM1-218ENST00000523055 POGKQ9P215 609 aa21.82■■□□□ 1.08
PCM1-218ENST00000523055 KIAA0232Q92628 1395 aa21.82■■□□□ 1.08
PCM1-218ENST00000523055 NEUROD1Q13562 356 aa21.81■■□□□ 1.08
PCM1-218ENST00000523055 TULP4Q9NRJ4 1543 aa21.81■■□□□ 1.08
PCM1-218ENST00000523055 UTRNP46939 3433 aa21.81■■□□□ 1.08
PCM1-218ENST00000523055 CHRNA2Q15822 529 aa21.8■■□□□ 1.08
PCM1-218ENST00000523055 L3MBTL2Q969R5 705 aa21.8■■□□□ 1.08
PCM1-218ENST00000523055 TRPM1Q7Z4N2 1603 aa21.79■■□□□ 1.08
PCM1-218ENST00000523055 STRN4Q9NRL3 753 aa21.78■■□□□ 1.08
PCM1-218ENST00000523055 MINK1Q8N4C8 1332 aaPredicted RBP21.77■■□□□ 1.08
PCM1-218ENST00000523055 WASLO00401 505 aaPredicted RBP21.77■■□□□ 1.08
PCM1-218ENST00000523055 NBPF1Q3BBV0 1214 aa21.77■■□□□ 1.08
PCM1-218ENST00000523055 BARGINQ6ZT62 677 aa21.77■■□□□ 1.08
PCM1-218ENST00000523055 PHRF1Q9P1Y6 1649 aaKnown RBP21.76■■□□□ 1.07
PCM1-218ENST00000523055 PAK3O75914 559 aaPredicted RBP21.76■■□□□ 1.07
PCM1-218ENST00000523055 NGDNQ8NEJ9 315 aaKnown RBP21.75■■□□□ 1.07
PCM1-218ENST00000523055 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
PCM1-218ENST00000523055 SSH2Q76I76 1423 aa21.74■■□□□ 1.07
PCM1-218ENST00000523055 USP35Q9P2H5 1018 aa21.74■■□□□ 1.07
PCM1-218ENST00000523055 ZC3H6P61129 1189 aaKnown RBP21.73■■□□□ 1.07
PCM1-218ENST00000523055 SPON1Q9HCB6 807 aa21.73■■□□□ 1.07
PCM1-218ENST00000523055 NINLQ9Y2I6 1382 aa21.73■■□□□ 1.07
PCM1-218ENST00000523055 CAMTA1Q9Y6Y1 1673 aa21.73■■□□□ 1.07
PCM1-218ENST00000523055 KCNQ2O43526 872 aa21.72■■□□□ 1.07
PCM1-218ENST00000523055 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
PCM1-218ENST00000523055 NBPF14Q5TI25 921 aa21.72■■□□□ 1.07
PCM1-218ENST00000523055 ATP7BP35670 1465 aa21.72■■□□□ 1.07
PCM1-218ENST00000523055 PDE3BQ13370 1112 aa21.71■■□□□ 1.07
PCM1-218ENST00000523055 LARP1Q6PKG0 1096 aaKnown RBP21.71■■□□□ 1.07
PCM1-218ENST00000523055 QRICH2Q9H0J4 1663 aa21.71■■□□□ 1.07
PCM1-218ENST00000523055 PPP1R1BQ9UD71 204 aaPredicted RBP21.69■■□□□ 1.06
PCM1-218ENST00000523055 LMO7Q8WWI1 1683 aa21.69■■□□□ 1.06
PCM1-218ENST00000523055 ITSN1Q15811 1721 aa21.68■■□□□ 1.06
PCM1-218ENST00000523055 NUTM2GQ5VZR2 741 aa21.68■■□□□ 1.06
PCM1-218ENST00000523055 NRKQ7Z2Y5 1582 aa21.67■■□□□ 1.06
PCM1-218ENST00000523055 TCP11L2Q8N4U5 519 aa21.67■■□□□ 1.06
PCM1-218ENST00000523055 NUDT16Q96DE0 195 aaKnown RBP21.66■■□□□ 1.06
PCM1-218ENST00000523055 EVA1CP58658 441 aa21.65■■□□□ 1.06
PCM1-218ENST00000523055 ANO8Q9HCE9 1232 aaPredicted RBP21.65■■□□□ 1.06
PCM1-218ENST00000523055 TOPAZ1Q8N9V7 1692 aa21.65■■□□□ 1.06
PCM1-218ENST00000523055 POLR3AO14802 1390 aaPredicted RBP21.65■■□□□ 1.06
PCM1-218ENST00000523055 CPDO75976 1380 aa21.65■■□□□ 1.06
PCM1-218ENST00000523055 PEAK1Q9H792 1746 aa21.65■■□□□ 1.06
PCM1-218ENST00000523055 PDGFDQ9GZP0 370 aaPredicted RBP21.64■■□□□ 1.06
PCM1-218ENST00000523055 CASZ1Q86V15 1759 aa21.64■■□□□ 1.05
PCM1-218ENST00000523055 PARP4Q9UKK3 1724 aaKnown RBP21.64■■□□□ 1.05
PCM1-218ENST00000523055 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
PCM1-218ENST00000523055 THRAP3Q9Y2W1 955 aaKnown RBP21.63■■□□□ 1.05
PCM1-218ENST00000523055 USP19O94966 1318 aa21.62■■□□□ 1.05
PCM1-218ENST00000523055 RGPD3A6NKT7 1758 aaPredicted RBP21.61■■□□□ 1.05
PCM1-218ENST00000523055 RGPD4Q7Z3J3 1758 aa21.61■■□□□ 1.05
PCM1-218ENST00000523055 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
PCM1-218ENST00000523055 PLSCR1O15162 318 aa21.61■■□□□ 1.05
PCM1-218ENST00000523055 PTF1AQ7RTS3 328 aa21.61■■□□□ 1.05
PCM1-218ENST00000523055 ZNF784Q8NCA9 323 aaPredicted RBP21.61■■□□□ 1.05
PCM1-218ENST00000523055 ROCK2O75116 1388 aaKnown RBP21.6■■□□□ 1.05
PCM1-218ENST00000523055 ACEP12821 1306 aa21.6■■□□□ 1.05
PCM1-218ENST00000523055 COL5A2P05997 1499 aaPredicted RBP21.59■■□□□ 1.05
PCM1-218ENST00000523055 SBF2Q86WG5 1849 aa21.59■■□□□ 1.05
PCM1-218ENST00000523055 DCAF8L1A6NGE4 600 aa21.59■■□□□ 1.05
PCM1-218ENST00000523055 PROM2Q8N271 834 aa21.59■■□□□ 1.05
PCM1-218ENST00000523055 CENPJQ9HC77 1338 aaPredicted RBP21.58■■□□□ 1.05
PCM1-218ENST00000523055 PTGER2P43116 358 aa21.58■■□□□ 1.05
PCM1-218ENST00000523055 OVOS2A0A0G2JMS6 1433 aa21.57■■□□□ 1.04
PCM1-218ENST00000523055 OVOS2A0A0J9YW53 1432 aa21.57■■□□□ 1.04
PCM1-218ENST00000523055 OVOS2Q6IE36 1432 aa21.57■■□□□ 1.04
PCM1-218ENST00000523055 CDK19Q9BWU1 502 aa21.57■■□□□ 1.04
PCM1-218ENST00000523055 PLEKHG3A1L390 1219 aa21.56■■□□□ 1.04
PCM1-218ENST00000523055 MYOM1P52179 1685 aa21.56■■□□□ 1.04
PCM1-218ENST00000523055 GCP02774 474 aa21.55■■□□□ 1.04
PCM1-218ENST00000523055 ABTB2Q8N961 1025 aa21.55■■□□□ 1.04
PCM1-218ENST00000523055 C11orf95C9JLR9 678 aaPredicted RBP21.55■■□□□ 1.04
PCM1-218ENST00000523055 CCDC61Q9Y6R9 512 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms