RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 HLA-CQ95604 372 aa4.84□□□□□ -1.63
RNU2-56P-201ENST00000516826 CNTNAP3BQ96NU0 1288 aa4.84□□□□□ -1.63
RNU2-56P-201ENST00000516826 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
RNU2-56P-201ENST00000516826 CNTNAP3Q9BZ76 1288 aa4.84□□□□□ -1.63
RNU2-56P-201ENST00000516826 UNC93B1Q9H1C4 597 aa4.84□□□□□ -1.63
RNU2-56P-201ENST00000516826 TLL2Q9Y6L7 1015 aa4.84□□□□□ -1.63
RNU2-56P-201ENST00000516826 SLURP2P0DP57 97 aa4.83□□□□□ -1.64
RNU2-56P-201ENST00000516826 IRS1P35568 1242 aa4.83□□□□□ -1.64
RNU2-56P-201ENST00000516826 KCNH2Q12809 1159 aa4.83□□□□□ -1.64
RNU2-56P-201ENST00000516826 NR5A1Q13285 461 aa4.83□□□□□ -1.64
RNU2-56P-201ENST00000516826 BAP1Q92560 729 aa4.83□□□□□ -1.64
RNU2-56P-201ENST00000516826 SCARF2Q96GP6 870 aaPredicted RBP4.83□□□□□ -1.64
RNU2-56P-201ENST00000516826 SOS2Q07890 1332 aaPredicted RBP4.82□□□□□ -1.64
RNU2-56P-201ENST00000516826 ADAM23O75077 832 aa4.82□□□□□ -1.64
RNU2-56P-201ENST00000516826 UPP2O95045 317 aa4.82□□□□□ -1.64
RNU2-56P-201ENST00000516826 FAM174AQ8TBP5 190 aa4.82□□□□□ -1.64
RNU2-56P-201ENST00000516826 SYMPKQ92797 1274 aaKnown RBP4.82□□□□□ -1.64
RNU2-56P-201ENST00000516826 SPTLC1O15269 473 aa4.81□□□□□ -1.64
RNU2-56P-201ENST00000516826 ZIC2O95409 532 aaPredicted RBP4.81□□□□□ -1.64
RNU2-56P-201ENST00000516826 DESI1Q6ICB0 168 aa4.81□□□□□ -1.64
RNU2-56P-201ENST00000516826 SVOPQ8N4V2 548 aa4.81□□□□□ -1.64
RNU2-56P-201ENST00000516826 COL25A1Q9BXS0 654 aaPredicted RBP4.81□□□□□ -1.64
RNU2-56P-201ENST00000516826 MARSP56192 900 aaKnown RBP4.8□□□□□ -1.64
RNU2-56P-201ENST00000516826 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.8□□□□□ -1.64
RNU2-56P-201ENST00000516826 C6orf118Q5T5N4 469 aa4.8□□□□□ -1.64
RNU2-56P-201ENST00000516826 ITPKCQ96DU7 683 aa4.8□□□□□ -1.64
RNU2-56P-201ENST00000516826 DNMT3LQ9UJW3 386 aa4.8□□□□□ -1.64
RNU2-56P-201ENST00000516826 MSTNO14793 375 aa4.79□□□□□ -1.64
RNU2-56P-201ENST00000516826 BMP2P12643 396 aa4.79□□□□□ -1.64
RNU2-56P-201ENST00000516826 GUCA2AQ02747 115 aa4.79□□□□□ -1.64
RNU2-56P-201ENST00000516826 LINC01559Q495D7 138 aa4.79□□□□□ -1.64
RNU2-56P-201ENST00000516826 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
RNU2-56P-201ENST00000516826 MEIOBQ8N635 442 aa4.79□□□□□ -1.64
RNU2-56P-201ENST00000516826 ZFAND3Q9H8U3 227 aa4.79□□□□□ -1.64
RNU2-56P-201ENST00000516826 TSHZ2Q9NRE2 1034 aa4.79□□□□□ -1.64
RNU2-56P-201ENST00000516826 GRM5P41594 1212 aa4.78□□□□□ -1.64
RNU2-56P-201ENST00000516826 TSEN34Q9BSV6 310 aaKnown RBP4.78□□□□□ -1.64
RNU2-56P-201ENST00000516826 SPDYE5A6NIY4 337 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 C6orf229H3BNL8 230 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 FDX1P10109 184 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 PTSQ03393 145 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 MAP2K5Q13163 448 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 RNFT1Q5M7Z0 435 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 NUTM1Q86Y26 1132 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 WHAMMQ8TF30 809 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 PCDHGC3Q9UN70 934 aa4.77□□□□□ -1.65
RNU2-56P-201ENST00000516826 IRF6O14896 467 aa4.76□□□□□ -1.65
RNU2-56P-201ENST00000516826 NR3C2P08235 984 aa4.76□□□□□ -1.65
RNU2-56P-201ENST00000516826 MDM2Q00987 491 aaPredicted RBP4.76□□□□□ -1.65
RNU2-56P-201ENST00000516826 TTLL8A6PVC2 850 aa4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 PLA2G4EQ3MJ16 856 aa4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 GPIHBP1Q8IV16 184 aa4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 CCDC155Q8N6L0 562 aa4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 PSMG3-AS1Q96PY0 264 aa4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 SPOCK3Q9BQ16 436 aa4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 KRTAP9-2Q9BYQ4 174 aa4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 GPCPD1Q9NPB8 672 aa4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 FAM217BQ9NTX9 383 aaPredicted RBP4.75□□□□□ -1.65
RNU2-56P-201ENST00000516826 MINK1Q8N4C8 1332 aaPredicted RBP4.74□□□□□ -1.65
RNU2-56P-201ENST00000516826 SLC35F4A4IF30 521 aa4.74□□□□□ -1.65
RNU2-56P-201ENST00000516826 CLCN1P35523 988 aa4.74□□□□□ -1.65
RNU2-56P-201ENST00000516826 SRSF11Q05519 484 aaKnown RBP4.74□□□□□ -1.65
RNU2-56P-201ENST00000516826 ARID5BQ14865 1188 aa4.74□□□□□ -1.65
RNU2-56P-201ENST00000516826 SV2AQ7L0J3 742 aa4.74□□□□□ -1.65
RNU2-56P-201ENST00000516826 PRR7Q8TB68 274 aa4.74□□□□□ -1.65
RNU2-56P-201ENST00000516826 ENAMQ9NRM1 1142 aa4.74□□□□□ -1.65
RNU2-56P-201ENST00000516826 PHF20L1A8MW92 1017 aa4.73□□□□□ -1.65
RNU2-56P-201ENST00000516826 ITGA6P23229 1130 aa4.73□□□□□ -1.65
RNU2-56P-201ENST00000516826 LYPD8Q6UX82 237 aa4.73□□□□□ -1.65
RNU2-56P-201ENST00000516826 FOXJ1Q92949 421 aa4.73□□□□□ -1.65
RNU2-56P-201ENST00000516826 DCAF5Q96JK2 942 aa4.73□□□□□ -1.65
RNU2-56P-201ENST00000516826 MAP4K5Q9Y4K4 846 aa4.73□□□□□ -1.65
RNU2-56P-201ENST00000516826 EMILIN1Q9Y6C2 1016 aa4.73□□□□□ -1.65
RNU2-56P-201ENST00000516826 ADAMTS2O95450 1211 aa4.72□□□□□ -1.65
RNU2-56P-201ENST00000516826 PROCP04070 461 aa4.72□□□□□ -1.65
RNU2-56P-201ENST00000516826 MAP3K10Q02779 954 aa4.72□□□□□ -1.65
RNU2-56P-201ENST00000516826 MTMR2Q13614 643 aa4.72□□□□□ -1.65
RNU2-56P-201ENST00000516826 LYPD4Q6UWN0 246 aa4.72□□□□□ -1.65
RNU2-56P-201ENST00000516826 BPHLQ86WA6 291 aaPredicted RBP4.72□□□□□ -1.65
RNU2-56P-201ENST00000516826 VWA5B2Q8N398 1253 aa4.72□□□□□ -1.65
RNU2-56P-201ENST00000516826 BEND7Q8N7W2 519 aaPredicted RBP4.72□□□□□ -1.65
RNU2-56P-201ENST00000516826 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
RNU2-56P-201ENST00000516826 SPINT1O43278 529 aa4.71□□□□□ -1.66
RNU2-56P-201ENST00000516826 ITGB2P05107 769 aa4.71□□□□□ -1.66
RNU2-56P-201ENST00000516826 GJA5P36382 358 aa4.71□□□□□ -1.66
RNU2-56P-201ENST00000516826 K7ELQ4 463 aaPredicted RBP4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 CELA2BP08218 269 aaPredicted RBP4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 CTHP32929 405 aa4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 C4orf48Q5BLP8 95 aa4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 Q6ZVU0 165 aa4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 TRMT44Q8IYL2 757 aaKnown RBP4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 Q8N3U1 123 aa4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 SPIRE2Q8WWL2 714 aa4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 C1QTNF2Q9BXJ5 285 aa4.7□□□□□ -1.66
RNU2-56P-201ENST00000516826 F12P00748 615 aaPredicted RBP4.69□□□□□ -1.66
RNU2-56P-201ENST00000516826 LRRC4BQ9NT99 713 aa4.69□□□□□ -1.66
RNU2-56P-201ENST00000516826 FIGNL2A6NMB9 653 aa4.68□□□□□ -1.66
RNU2-56P-201ENST00000516826 AGERQ15109 404 aa4.68□□□□□ -1.66
RNU2-56P-201ENST00000516826 SH3RF1Q7Z6J0 888 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms