RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 WASF2Q9Y6W5 498 aa6.48□□□□□ -1.37
SCARNA16.2-201ENST00000516520 SIAH2O43255 324 aa6.47□□□□□ -1.37
SCARNA16.2-201ENST00000516520 LILRB3O75022 631 aa6.47□□□□□ -1.37
SCARNA16.2-201ENST00000516520 F12P00748 615 aaPredicted RBP6.47□□□□□ -1.37
SCARNA16.2-201ENST00000516520 VARSP26640 1264 aaKnown RBP6.47□□□□□ -1.37
SCARNA16.2-201ENST00000516520 ZNF775Q96BV0 537 aaPredicted RBP6.47□□□□□ -1.37
SCARNA16.2-201ENST00000516520 PLEKHG3A1L390 1219 aa6.46□□□□□ -1.38
SCARNA16.2-201ENST00000516520 POTECB2RU33 542 aa6.46□□□□□ -1.38
SCARNA16.2-201ENST00000516520 MPNDQ8N594 471 aa6.46□□□□□ -1.38
SCARNA16.2-201ENST00000516520 TSC1Q92574 1164 aa6.46□□□□□ -1.38
SCARNA16.2-201ENST00000516520 HPS1Q92902 700 aa6.46□□□□□ -1.38
SCARNA16.2-201ENST00000516520 ATP13A2Q9NQ11 1180 aa6.46□□□□□ -1.38
SCARNA16.2-201ENST00000516520 GMPR2Q9P2T1 348 aaKnown RBP6.46□□□□□ -1.38
SCARNA16.2-201ENST00000516520 DACH1Q9UI36 760 aa6.46□□□□□ -1.38
SCARNA16.2-201ENST00000516520 QPCTQ16769 361 aa6.45□□□□□ -1.38
SCARNA16.2-201ENST00000516520 ARMC2Q8NEN0 867 aa6.45□□□□□ -1.38
SCARNA16.2-201ENST00000516520 FAM174AQ8TBP5 190 aa6.45□□□□□ -1.38
SCARNA16.2-201ENST00000516520 DDRGK1Q96HY6 314 aa6.45□□□□□ -1.38
SCARNA16.2-201ENST00000516520 SENP2Q9HC62 589 aa6.45□□□□□ -1.38
SCARNA16.2-201ENST00000516520 MAP10Q9P2G4 905 aa6.45□□□□□ -1.38
SCARNA16.2-201ENST00000516520 C11orf95C9JLR9 678 aaPredicted RBP6.44□□□□□ -1.38
SCARNA16.2-201ENST00000516520 PER1O15534 1290 aaPredicted RBP6.43□□□□□ -1.38
SCARNA16.2-201ENST00000516520 SH3D19Q5HYK7 790 aa6.43□□□□□ -1.38
SCARNA16.2-201ENST00000516520 KIFC2Q96AC6 838 aa6.43□□□□□ -1.38
SCARNA16.2-201ENST00000516520 KDM4CQ9H3R0 1056 aa6.43□□□□□ -1.38
SCARNA16.2-201ENST00000516520 POLR3EQ9NVU0 708 aa6.43□□□□□ -1.38
SCARNA16.2-201ENST00000516520 TLL2Q9Y6L7 1015 aa6.43□□□□□ -1.38
SCARNA16.2-201ENST00000516520 SKIV2LQ15477 1246 aaKnown RBP6.42□□□□□ -1.38
SCARNA16.2-201ENST00000516520 NBPF14Q5TI25 921 aa6.42□□□□□ -1.38
SCARNA16.2-201ENST00000516520 BPHLQ86WA6 291 aaPredicted RBP6.42□□□□□ -1.38
SCARNA16.2-201ENST00000516520 TRIM47Q96LD4 638 aa6.42□□□□□ -1.38
SCARNA16.2-201ENST00000516520 CAPN5O15484 640 aaPredicted RBP6.41□□□□□ -1.38
SCARNA16.2-201ENST00000516520 AGERQ15109 404 aa6.41□□□□□ -1.38
SCARNA16.2-201ENST00000516520 RTL5Q5HYW3 569 aaPredicted RBP6.41□□□□□ -1.38
SCARNA16.2-201ENST00000516520 GPBP1L1Q9HC44 474 aaPredicted RBP6.41□□□□□ -1.38
SCARNA16.2-201ENST00000516520 NNTQ13423 1086 aa6.4□□□□□ -1.38
SCARNA16.2-201ENST00000516520 GPKOWQ92917 476 aaPredicted RBP eCLIP6.4□□□□□ -1.38
SCARNA16.2-201ENST00000516520 FOXJ1Q92949 421 aa6.4□□□□□ -1.38
SCARNA16.2-201ENST00000516520 ADH1CP00326 375 aa6.39□□□□□ -1.39
SCARNA16.2-201ENST00000516520 CDK15Q96Q40 435 aa6.39□□□□□ -1.39
SCARNA16.2-201ENST00000516520 ATP1B4Q9UN42 357 aaPredicted RBP6.39□□□□□ -1.39
SCARNA16.2-201ENST00000516520 TREML4Q6UXN2 200 aa6.38□□□□□ -1.39
SCARNA16.2-201ENST00000516520 FAM117AQ9C073 453 aa6.38□□□□□ -1.39
SCARNA16.2-201ENST00000516520 NR5A1Q13285 461 aa6.37□□□□□ -1.39
SCARNA16.2-201ENST00000516520 ARID5BQ14865 1188 aa6.37□□□□□ -1.39
SCARNA16.2-201ENST00000516520 PPP2R2DQ66LE6 453 aa6.37□□□□□ -1.39
SCARNA16.2-201ENST00000516520 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCARNA16.2-201ENST00000516520 C1QTNF2Q9BXJ5 285 aa6.37□□□□□ -1.39
SCARNA16.2-201ENST00000516520 BMP1P13497 986 aa6.36□□□□□ -1.39
SCARNA16.2-201ENST00000516520 SNRPBP14678 240 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.2-201ENST00000516520 WDR4P57081 412 aaKnown RBP6.36□□□□□ -1.39
SCARNA16.2-201ENST00000516520 CTDSPL2Q05D32 466 aa6.36□□□□□ -1.39
SCARNA16.2-201ENST00000516520 C4orf48Q5BLP8 95 aa6.36□□□□□ -1.39
SCARNA16.2-201ENST00000516520 SH3BP5LQ7L8J4 393 aa6.36□□□□□ -1.39
SCARNA16.2-201ENST00000516520 TRIM46Q7Z4K8 759 aa6.36□□□□□ -1.39
SCARNA16.2-201ENST00000516520 SH3RF1Q7Z6J0 888 aa6.36□□□□□ -1.39
SCARNA16.2-201ENST00000516520 ZC3H4Q9UPT8 1303 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.2-201ENST00000516520 WFS1O76024 890 aa6.35□□□□□ -1.39
SCARNA16.2-201ENST00000516520 TIMP2P16035 220 aa6.35□□□□□ -1.39
SCARNA16.2-201ENST00000516520 TRMT44Q8IYL2 757 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.2-201ENST00000516520 PROCA1Q8NCQ7 364 aaPredicted RBP6.35□□□□□ -1.39
SCARNA16.2-201ENST00000516520 MAP4K5Q9Y4K4 846 aa6.35□□□□□ -1.39
SCARNA16.2-201ENST00000516520 SCARF1Q14162 830 aa6.34□□□□□ -1.39
SCARNA16.2-201ENST00000516520 PDXDC2PQ6P474 469 aa6.34□□□□□ -1.39
SCARNA16.2-201ENST00000516520 PNMA1Q8ND90 353 aa6.34□□□□□ -1.39
SCARNA16.2-201ENST00000516520 FKBPLQ9UIM3 349 aa6.34□□□□□ -1.39
SCARNA16.2-201ENST00000516520 MAGEB6P1A0A0J9YX57 407 aa6.33□□□□□ -1.4
SCARNA16.2-201ENST00000516520 MRPL14Q6P1L8 145 aaKnown RBP6.33□□□□□ -1.4
SCARNA16.2-201ENST00000516520 KLF16Q9BXK1 252 aaPredicted RBP6.33□□□□□ -1.4
SCARNA16.2-201ENST00000516520 GOPCQ9HD26 462 aa6.33□□□□□ -1.4
SCARNA16.2-201ENST00000516520 TERTO14746 1132 aaKnown RBP6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 AP1G2O75843 785 aa6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 ZIC2O95409 532 aaPredicted RBP6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 FSHRP23945 695 aa6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 GRM5P41594 1212 aa6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 NFX1Q12986 1120 aaKnown RBP6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 VASH1Q7L8A9 365 aaPredicted RBP6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 LRRN4Q8WUT4 740 aa6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 PCMTD1Q96MG8 357 aaPredicted RBP6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 ARHGAP9Q9BRR9 750 aa6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 CDV3Q9UKY7 258 aaKnown RBP6.32□□□□□ -1.4
SCARNA16.2-201ENST00000516520 NR3C2P08235 984 aa6.31□□□□□ -1.4
SCARNA16.2-201ENST00000516520 NEUROD2Q15784 382 aa6.31□□□□□ -1.4
SCARNA16.2-201ENST00000516520 SLC10A4Q96EP9 437 aa6.31□□□□□ -1.4
SCARNA16.2-201ENST00000516520 ZFP42Q96MM3 310 aa6.31□□□□□ -1.4
SCARNA16.2-201ENST00000516520 CARD14Q9BXL6 1004 aa6.31□□□□□ -1.4
SCARNA16.2-201ENST00000516520 GPSM3Q9Y4H4 160 aa6.31□□□□□ -1.4
SCARNA16.2-201ENST00000516520 UPP2O95045 317 aa6.3□□□□□ -1.4
SCARNA16.2-201ENST00000516520 PTK2Q05397 1052 aa6.3□□□□□ -1.4
SCARNA16.2-201ENST00000516520 NR6A1Q15406 480 aa6.3□□□□□ -1.4
SCARNA16.2-201ENST00000516520 ERFEQ4G0M1 354 aa6.3□□□□□ -1.4
SCARNA16.2-201ENST00000516520 NPAS3Q8IXF0 933 aa6.3□□□□□ -1.4
SCARNA16.2-201ENST00000516520 SLC16A10Q8TF71 515 aa6.3□□□□□ -1.4
SCARNA16.2-201ENST00000516520 ITPKCQ96DU7 683 aa6.3□□□□□ -1.4
SCARNA16.2-201ENST00000516520 EMILIN1Q9Y6C2 1016 aa6.3□□□□□ -1.4
SCARNA16.2-201ENST00000516520 USP17L8P0C7I0 530 aa6.29□□□□□ -1.4
SCARNA16.2-201ENST00000516520 RFC5P40937 340 aa6.29□□□□□ -1.4
SCARNA16.2-201ENST00000516520 FBXO31Q5XUX0 539 aaPredicted RBP6.29□□□□□ -1.4
SCARNA16.2-201ENST00000516520 ZBTB33Q86T24 672 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms