RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 MPNDQ8N594 471 aa4.28□□□□□ -1.72
SNORA40.13-201ENST00000516379 RDH13Q8NBN7 331 aa4.28□□□□□ -1.72
SNORA40.13-201ENST00000516379 USB1Q9BQ65 265 aaKnown RBP4.28□□□□□ -1.72
SNORA40.13-201ENST00000516379 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
SNORA40.13-201ENST00000516379 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
SNORA40.13-201ENST00000516379 PTSQ03393 145 aa4.27□□□□□ -1.73
SNORA40.13-201ENST00000516379 Q3C1V9 767 aa4.27□□□□□ -1.73
SNORA40.13-201ENST00000516379 KRBA1A5PL33 1030 aa4.26□□□□□ -1.73
SNORA40.13-201ENST00000516379 OATP04181 439 aa4.26□□□□□ -1.73
SNORA40.13-201ENST00000516379 MAP3K10Q02779 954 aa4.26□□□□□ -1.73
SNORA40.13-201ENST00000516379 METTL3Q86U44 580 aaKnown RBP4.26□□□□□ -1.73
SNORA40.13-201ENST00000516379 BEND7Q8N7W2 519 aaPredicted RBP4.26□□□□□ -1.73
SNORA40.13-201ENST00000516379 ZFAND3Q9H8U3 227 aa4.25□□□□□ -1.73
SNORA40.13-201ENST00000516379 DAXXQ9UER7 740 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.13-201ENST00000516379 PLEKHG3A1L390 1219 aa4.24□□□□□ -1.73
SNORA40.13-201ENST00000516379 DDX11L8A8MPP1 907 aa4.24□□□□□ -1.73
SNORA40.13-201ENST00000516379 SRSF11Q05519 484 aaKnown RBP4.24□□□□□ -1.73
SNORA40.13-201ENST00000516379 VWA5B2Q8N398 1253 aa4.24□□□□□ -1.73
SNORA40.13-201ENST00000516379 CCDC155Q8N6L0 562 aa4.24□□□□□ -1.73
SNORA40.13-201ENST00000516379 ITPKCQ96DU7 683 aa4.24□□□□□ -1.73
SNORA40.13-201ENST00000516379 ENAMQ9NRM1 1142 aa4.24□□□□□ -1.73
SNORA40.13-201ENST00000516379 ZIC2O95409 532 aaPredicted RBP4.23□□□□□ -1.73
SNORA40.13-201ENST00000516379 BMP2P12643 396 aa4.23□□□□□ -1.73
SNORA40.13-201ENST00000516379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.23□□□□□ -1.73
SNORA40.13-201ENST00000516379 GRIPAP1Q4V328 841 aa4.23□□□□□ -1.73
SNORA40.13-201ENST00000516379 LINC00528Q8N1L1 170 aa4.23□□□□□ -1.73
SNORA40.13-201ENST00000516379 KRTAP17-1Q9BYP8 105 aa4.23□□□□□ -1.73
SNORA40.13-201ENST00000516379 SLC35F4A4IF30 521 aa4.22□□□□□ -1.73
SNORA40.13-201ENST00000516379 ITGA6P23229 1130 aa4.22□□□□□ -1.73
SNORA40.13-201ENST00000516379 ZMYM1Q5SVZ6 1142 aa4.22□□□□□ -1.73
SNORA40.13-201ENST00000516379 MLLT3P42568 568 aaPredicted RBP4.21□□□□□ -1.74
SNORA40.13-201ENST00000516379 SV2AQ7L0J3 742 aa4.21□□□□□ -1.74
SNORA40.13-201ENST00000516379 PODNQ7Z5L7 613 aa4.21□□□□□ -1.74
SNORA40.13-201ENST00000516379 MEIOBQ8N635 442 aa4.21□□□□□ -1.74
SNORA40.13-201ENST00000516379 JUNDP17535 347 aa4.2□□□□□ -1.74
SNORA40.13-201ENST00000516379 VARSP26640 1264 aaKnown RBP4.2□□□□□ -1.74
SNORA40.13-201ENST00000516379 GAS6Q14393 721 aa4.2□□□□□ -1.74
SNORA40.13-201ENST00000516379 SH3RF1Q7Z6J0 888 aa4.2□□□□□ -1.74
SNORA40.13-201ENST00000516379 NUDT12Q9BQG2 462 aa4.2□□□□□ -1.74
SNORA40.13-201ENST00000516379 CDC14CA4D256 554 aa4.19□□□□□ -1.74
SNORA40.13-201ENST00000516379 TTLL8A6PVC2 850 aa4.19□□□□□ -1.74
SNORA40.13-201ENST00000516379 UPP2O95045 317 aa4.19□□□□□ -1.74
SNORA40.13-201ENST00000516379 FOXD4L6Q3SYB3 417 aaPredicted RBP4.19□□□□□ -1.74
SNORA40.13-201ENST00000516379 FOXD4L3Q6VB84 417 aaPredicted RBP4.19□□□□□ -1.74
SNORA40.13-201ENST00000516379 CDK15Q96Q40 435 aa4.19□□□□□ -1.74
SNORA40.13-201ENST00000516379 NR3C2P08235 984 aa4.18□□□□□ -1.74
SNORA40.13-201ENST00000516379 SULF1Q8IWU6 871 aa4.18□□□□□ -1.74
SNORA40.13-201ENST00000516379 COL8A1P27658 744 aa4.17□□□□□ -1.74
SNORA40.13-201ENST00000516379 LINC01559Q495D7 138 aa4.17□□□□□ -1.74
SNORA40.13-201ENST00000516379 NEDD1Q8NHV4 660 aa4.17□□□□□ -1.74
SNORA40.13-201ENST00000516379 NLRP7Q8WX94 980 aa4.17□□□□□ -1.74
SNORA40.13-201ENST00000516379 BAP1Q92560 729 aa4.17□□□□□ -1.74
SNORA40.13-201ENST00000516379 SEMA6BQ9H3T3 888 aa4.17□□□□□ -1.74
SNORA40.13-201ENST00000516379 NUTM2FA1L443 756 aa4.16□□□□□ -1.74
SNORA40.13-201ENST00000516379 FIGNL2A6NMB9 653 aa4.16□□□□□ -1.74
SNORA40.13-201ENST00000516379 FCHSD2O94868 740 aa4.16□□□□□ -1.74
SNORA40.13-201ENST00000516379 BCRP11274 1271 aa4.16□□□□□ -1.74
SNORA40.13-201ENST00000516379 ALYREFQ86V81 257 aaKnown RBP4.16□□□□□ -1.74
SNORA40.13-201ENST00000516379 ZNF511Q8NB15 262 aa4.16□□□□□ -1.74
SNORA40.13-201ENST00000516379 HLA-CQ95604 372 aa4.16□□□□□ -1.74
SNORA40.13-201ENST00000516379 UNC93B1Q9H1C4 597 aa4.16□□□□□ -1.74
SNORA40.13-201ENST00000516379 GRM5P41594 1212 aa4.15□□□□□ -1.75
SNORA40.13-201ENST00000516379 NR5A1Q13285 461 aa4.15□□□□□ -1.75
SNORA40.13-201ENST00000516379 TSEN34Q9BSV6 310 aaKnown RBP4.15□□□□□ -1.75
SNORA40.13-201ENST00000516379 SNRPNP63162 240 aaKnown RBP4.14□□□□□ -1.75
SNORA40.13-201ENST00000516379 ARTNQ5T4W7 220 aa4.14□□□□□ -1.75
SNORA40.13-201ENST00000516379 ACDQ96AP0 544 aa4.14□□□□□ -1.75
SNORA40.13-201ENST00000516379 ZFP64Q9NPA5 681 aa4.14□□□□□ -1.75
SNORA40.13-201ENST00000516379 LRRC4BQ9NT99 713 aa4.14□□□□□ -1.75
SNORA40.13-201ENST00000516379 SENP3-EIF4A1A0A087X0R7 540 aa4.13□□□□□ -1.75
SNORA40.13-201ENST00000516379 SCO2A0A1W2PP80 73 aa4.13□□□□□ -1.75
SNORA40.13-201ENST00000516379 SPTLC1O15269 473 aa4.13□□□□□ -1.75
SNORA40.13-201ENST00000516379 COBLO75128 1261 aa4.13□□□□□ -1.75
SNORA40.13-201ENST00000516379 CCNYL3P0C7X3 344 aa4.13□□□□□ -1.75
SNORA40.13-201ENST00000516379 FAM174AQ8TBP5 190 aa4.13□□□□□ -1.75
SNORA40.13-201ENST00000516379 SYMPKQ92797 1274 aaKnown RBP4.13□□□□□ -1.75
SNORA40.13-201ENST00000516379 PHOX2BQ99453 314 aa4.13□□□□□ -1.75
SNORA40.13-201ENST00000516379 C1QTNF9BB2RNN3 333 aa4.12□□□□□ -1.75
SNORA40.13-201ENST00000516379 MBIPQ9NS73 344 aa4.12□□□□□ -1.75
SNORA40.13-201ENST00000516379 EVA1BQ9NVM1 165 aa4.12□□□□□ -1.75
SNORA40.13-201ENST00000516379 IGF1RP08069 1367 aa4.12□□□□□ -1.75
SNORA40.13-201ENST00000516379 SPINT1O43278 529 aa4.11□□□□□ -1.75
SNORA40.13-201ENST00000516379 KDM4AO75164 1064 aa4.11□□□□□ -1.75
SNORA40.13-201ENST00000516379 CD163Q86VB7 1156 aa4.11□□□□□ -1.75
SNORA40.13-201ENST00000516379 CUEDC1Q9NWM3 386 aaPredicted RBP4.11□□□□□ -1.75
SNORA40.13-201ENST00000516379 CD46P15529 392 aa4.1□□□□□ -1.75
SNORA40.13-201ENST00000516379 HIC1Q14526 733 aa4.1□□□□□ -1.75
SNORA40.13-201ENST00000516379 ARID5BQ14865 1188 aa4.1□□□□□ -1.75
SNORA40.13-201ENST00000516379 RETREG3Q86VR2 466 aa4.1□□□□□ -1.75
SNORA40.13-201ENST00000516379 HOXA2O43364 376 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 OIP5O43482 229 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 MS4A1P11836 297 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 GUCA2AQ02747 115 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 KCNH2Q12809 1159 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 DOC2BQ14184 412 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 PTPRNQ16849 979 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 NBPF11Q86T75 865 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 WDR70Q9NW82 654 aa4.09□□□□□ -1.75
SNORA40.13-201ENST00000516379 CHRNA4P43681 627 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms