RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
DHFR-207ENST00000513314 LILRB3O75022 631 aa10.48□□□□□ -0.73
DHFR-207ENST00000513314 QPCTQ16769 361 aa10.48□□□□□ -0.73
DHFR-207ENST00000513314 LCE2AQ5TA79 106 aaPredicted RBP10.48□□□□□ -0.73
DHFR-207ENST00000513314 TREML4Q6UXN2 200 aa10.48□□□□□ -0.73
DHFR-207ENST00000513314 ZNF511Q8NB15 262 aa10.48□□□□□ -0.73
DHFR-207ENST00000513314 HPS1Q92902 700 aa10.48□□□□□ -0.73
DHFR-207ENST00000513314 GMPR2Q9P2T1 348 aaKnown RBP10.48□□□□□ -0.73
DHFR-207ENST00000513314 CLK2P49760 499 aaKnown RBP10.47□□□□□ -0.73
DHFR-207ENST00000513314 F12P00748 615 aaPredicted RBP10.46□□□□□ -0.73
DHFR-207ENST00000513314 TSC1Q92574 1164 aa10.46□□□□□ -0.73
DHFR-207ENST00000513314 VARSP26640 1264 aaKnown RBP10.45□□□□□ -0.74
DHFR-207ENST00000513314 POLR3EQ9NVU0 708 aa10.45□□□□□ -0.74
DHFR-207ENST00000513314 WASF2Q9Y6W5 498 aa10.45□□□□□ -0.74
DHFR-207ENST00000513314 C11orf95C9JLR9 678 aaPredicted RBP10.44□□□□□ -0.74
DHFR-207ENST00000513314 MAP10Q9P2G4 905 aa10.44□□□□□ -0.74
DHFR-207ENST00000513314 PER1O15534 1290 aaPredicted RBP10.43□□□□□ -0.74
DHFR-207ENST00000513314 RTL5Q5HYW3 569 aaPredicted RBP10.43□□□□□ -0.74
DHFR-207ENST00000513314 HELBQ8NG08 1087 aaPredicted RBP10.43□□□□□ -0.74
DHFR-207ENST00000513314 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
DHFR-207ENST00000513314 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
DHFR-207ENST00000513314 KDM4CQ9H3R0 1056 aa10.42□□□□□ -0.74
DHFR-207ENST00000513314 MPNDQ8N594 471 aa10.41□□□□□ -0.74
DHFR-207ENST00000513314 GPBP1L1Q9HC44 474 aaPredicted RBP10.41□□□□□ -0.74
DHFR-207ENST00000513314 DDRGK1Q96HY6 314 aa10.4□□□□□ -0.74
DHFR-207ENST00000513314 SKIV2LQ15477 1246 aaKnown RBP10.39□□□□□ -0.75
DHFR-207ENST00000513314 ARMC2Q8NEN0 867 aa10.39□□□□□ -0.75
DHFR-207ENST00000513314 FAM174AQ8TBP5 190 aa10.39□□□□□ -0.75
DHFR-207ENST00000513314 SENP2Q9HC62 589 aa10.39□□□□□ -0.75
DHFR-207ENST00000513314 TLL2Q9Y6L7 1015 aa10.39□□□□□ -0.75
DHFR-207ENST00000513314 SH3D19Q5HYK7 790 aa10.38□□□□□ -0.75
DHFR-207ENST00000513314 FOXJ1Q92949 421 aa10.38□□□□□ -0.75
DHFR-207ENST00000513314 FAM117AQ9C073 453 aa10.38□□□□□ -0.75
DHFR-207ENST00000513314 CAPN5O15484 640 aaPredicted RBP10.36□□□□□ -0.75
DHFR-207ENST00000513314 WFS1O76024 890 aa10.36□□□□□ -0.75
DHFR-207ENST00000513314 AGERQ15109 404 aa10.36□□□□□ -0.75
DHFR-207ENST00000513314 BPHLQ86WA6 291 aaPredicted RBP10.36□□□□□ -0.75
DHFR-207ENST00000513314 TRIM47Q96LD4 638 aa10.36□□□□□ -0.75
DHFR-207ENST00000513314 NFX1Q12986 1120 aaKnown RBP10.35□□□□□ -0.75
DHFR-207ENST00000513314 ATP1B4Q9UN42 357 aaPredicted RBP10.35□□□□□ -0.75
DHFR-207ENST00000513314 KIFC2Q96AC6 838 aa10.34□□□□□ -0.75
DHFR-207ENST00000513314 SNRPBP14678 240 aaKnown RBP10.33□□□□□ -0.76
DHFR-207ENST00000513314 CTDSPL2Q05D32 466 aa10.33□□□□□ -0.76
DHFR-207ENST00000513314 NNTQ13423 1086 aa10.33□□□□□ -0.76
DHFR-207ENST00000513314 NBPF14Q5TI25 921 aa10.33□□□□□ -0.76
DHFR-207ENST00000513314 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
DHFR-207ENST00000513314 CDK15Q96Q40 435 aa10.33□□□□□ -0.76
DHFR-207ENST00000513314 ADH1CP00326 375 aa10.32□□□□□ -0.76
DHFR-207ENST00000513314 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
DHFR-207ENST00000513314 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
DHFR-207ENST00000513314 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.31□□□□□ -0.769e-11■■□□□ 14.2
DHFR-207ENST00000513314 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
DHFR-207ENST00000513314 GPKOWQ92917 476 aaPredicted RBP eCLIP10.3□□□□□ -0.76
DHFR-207ENST00000513314 WIPF1O43516 503 aa10.29□□□□□ -0.76
DHFR-207ENST00000513314 BMP1P13497 986 aa10.29□□□□□ -0.76
DHFR-207ENST00000513314 NR5A1Q13285 461 aa10.28□□□□□ -0.76
DHFR-207ENST00000513314 SH3BP5LQ7L8J4 393 aa10.28□□□□□ -0.76
DHFR-207ENST00000513314 TRIM46Q7Z4K8 759 aa10.28□□□□□ -0.76
DHFR-207ENST00000513314 SH3RF1Q7Z6J0 888 aa10.28□□□□□ -0.76
DHFR-207ENST00000513314 TERTO14746 1132 aaKnown RBP10.27□□□□□ -0.77
DHFR-207ENST00000513314 WDR4P57081 412 aaKnown RBP10.27□□□□□ -0.77
DHFR-207ENST00000513314 FBXO31Q5XUX0 539 aaPredicted RBP10.27□□□□□ -0.77
DHFR-207ENST00000513314 LRRN4Q8WUT4 740 aa10.27□□□□□ -0.77
DHFR-207ENST00000513314 C1QTNF2Q9BXJ5 285 aa10.27□□□□□ -0.77
DHFR-207ENST00000513314 TIMP2P16035 220 aa10.26□□□□□ -0.77
DHFR-207ENST00000513314 MAGEB6P1A0A0J9YX57 407 aa10.25□□□□□ -0.77
DHFR-207ENST00000513314 GRM5P41594 1212 aa10.25□□□□□ -0.77
DHFR-207ENST00000513314 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
DHFR-207ENST00000513314 AP1G2O75843 785 aa10.24□□□□□ -0.77
DHFR-207ENST00000513314 TRMT44Q8IYL2 757 aaKnown RBP10.24□□□□□ -0.77
DHFR-207ENST00000513314 FKBPLQ9UIM3 349 aa10.24□□□□□ -0.77
DHFR-207ENST00000513314 MAP4K5Q9Y4K4 846 aa10.24□□□□□ -0.77
DHFR-207ENST00000513314 NEUROD2Q15784 382 aa10.23□□□□□ -0.77
DHFR-207ENST00000513314 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
DHFR-207ENST00000513314 PDXDC2PQ6P474 469 aa10.23□□□□□ -0.77
DHFR-207ENST00000513314 ZIC2O95409 532 aaPredicted RBP10.22□□□□□ -0.77
DHFR-207ENST00000513314 NR3C2P08235 984 aa10.22□□□□□ -0.77
DHFR-207ENST00000513314 SCARF1Q14162 830 aa10.22□□□□□ -0.77
DHFR-207ENST00000513314 NR6A1Q15406 480 aa10.22□□□□□ -0.77
DHFR-207ENST00000513314 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
DHFR-207ENST00000513314 VASH1Q7L8A9 365 aaPredicted RBP10.22□□□□□ -0.77
DHFR-207ENST00000513314 ZFP42Q96MM3 310 aa10.22□□□□□ -0.77
DHFR-207ENST00000513314 CARD14Q9BXL6 1004 aa10.22□□□□□ -0.77
DHFR-207ENST00000513314 GOPCQ9HD26 462 aa10.22□□□□□ -0.77
DHFR-207ENST00000513314 ZC3H4Q9UPT8 1303 aaKnown RBP10.22□□□□□ -0.77
DHFR-207ENST00000513314 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.77
DHFR-207ENST00000513314 ARHGAP9Q9BRR9 750 aa10.21□□□□□ -0.77
DHFR-207ENST00000513314 ERFEQ4G0M1 354 aa10.2□□□□□ -0.78
DHFR-207ENST00000513314 ITPKCQ96DU7 683 aa10.2□□□□□ -0.78
DHFR-207ENST00000513314 PCMTD1Q96MG8 357 aaPredicted RBP10.2□□□□□ -0.78
DHFR-207ENST00000513314 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
DHFR-207ENST00000513314 FSHRP23945 695 aa10.19□□□□□ -0.78
DHFR-207ENST00000513314 RFC5P40937 340 aa10.19□□□□□ -0.78
DHFR-207ENST00000513314 STK17AQ9UEE5 414 aa10.19□□□□□ -0.78
DHFR-207ENST00000513314 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
DHFR-207ENST00000513314 PNMA1Q8ND90 353 aa10.18□□□□□ -0.78
DHFR-207ENST00000513314 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
DHFR-207ENST00000513314 PTK2Q05397 1052 aa10.17□□□□□ -0.78
DHFR-207ENST00000513314 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
DHFR-207ENST00000513314 NPAS3Q8IXF0 933 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms